RNA–Protein interactions for RNA: ENST00000510563.5

TNFRSF25-218, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-218ENST00000510563 PUF60Q9UHX1 559 aaKnown RBP25.28■■□□□ 1.64
TNFRSF25-218ENST00000510563 C19orf67A6NJJ6 358 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 INO80B-WBP1J3KQ70 363 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 B4GALT5O43286 388 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 ERLIN2O94905 339 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 EYA4O95677 639 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 COL9A1P20849 921 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 GNL2Q13823 731 aaKnown RBP25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 KCNC3Q14003 757 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 ECM1Q16610 540 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 IFNLR1Q8IU57 520 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 ADHFE1Q8IWW8 467 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 FAM50BQ9Y247 325 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 HES2Q9Y543 173 aa25.27■■□□□ 1.64
TNFRSF25-218ENST00000510563 PI4K2BG5E9Z4 385 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 DDHD2O94830 711 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 U2AF2P26368 475 aaKnown RBP eCLIP25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 SLC11A1P49279 550 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 KRT17Q04695 432 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 COASYQ13057 564 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 PDE12Q6L8Q7 609 aaKnown RBP25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 LLGL2Q6P1M3 1020 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 TMC7Q7Z402 723 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 CDR2LQ86X02 465 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 AUTS2Q8WXX7 1259 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 POLR3CQ9BUI4 534 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 VN1R3Q9BXE9 311 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 RNF39Q9H2S5 420 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 RSAD1Q9HA92 442 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 PRKAG3Q9UGI9 489 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 PCDHB6Q9Y5E3 794 aa25.26■■□□□ 1.63
TNFRSF25-218ENST00000510563 GALTP07902 379 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 ALDH7A1P49419 539 aaKnown RBP25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 ORC2Q13416 577 aaPredicted RBP25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 TFDP1Q14186 410 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 BSNDQ8WZ55 320 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 PGBD4Q96DM1 585 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 TMX3Q96JJ7 454 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 C1QTNF1Q9BXJ1 281 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 DBR1Q9UK59 544 aaKnown RBP25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 USP15Q9Y4E8 981 aaPredicted RBP25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 IPPQ9Y573 584 aa25.25■■□□□ 1.63
TNFRSF25-218ENST00000510563 XRCC6P12956 609 aaKnown RBP eCLIP25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 ARF4P18085 180 aaPredicted RBP25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 NCLP19338 710 aaKnown RBP25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 RPA1P27694 616 aa25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 RNASELQ05823 741 aaKnown RBP25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 TMEM169Q96HH4 297 aa25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 IGSF21Q96ID5 467 aa25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 CDCA3Q99618 268 aaPredicted RBP25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 LRFN3Q9BTN0 628 aa25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 APOL5Q9BWW9 433 aa25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 POLD4Q9HCU8 107 aa25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 NOL7Q9UMY1 257 aaKnown RBP25.24■■□□□ 1.63
TNFRSF25-218ENST00000510563 C2orf71A6NGG8 1288 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 POMCP01189 267 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 TRAPPC10P48553 1259 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 POU5F1BQ06416 359 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 NACC1Q96RE7 527 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 ZBP1Q9H171 429 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 NGRNQ9NPE2 291 aaKnown RBP25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 CDH22Q9UJ99 828 aa25.23■■□□□ 1.63
TNFRSF25-218ENST00000510563 LRRIQ4A6NIV6 560 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 TTLL13PA6NNM8 815 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 ST18O60284 1047 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 CA8P35219 290 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 FXR2P51116 673 aaKnown RBP eCLIP25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 PTGDRQ13258 359 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 SMC1AQ14683 1233 aaKnown RBP25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 IL17AQ16552 155 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 NOTUMQ6P988 496 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 SYCE2Q6PIF2 218 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 VPS52Q8N1B4 723 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 MRPL43Q8N983 215 aaKnown RBP25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 ERMNQ8TAM6 284 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 URGCPQ8TCY9 931 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 APOL6Q9BWW8 343 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 NFKBIZQ9BYH8 718 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 CSRNP2Q9H175 543 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 NXF3Q9H4D5 531 aaKnown RBP25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 MIOSQ9NXC5 875 aa25.22■■□□□ 1.63
TNFRSF25-218ENST00000510563 PLXNA3P51805 1871 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 CNTNAP2Q9UHC6 1331 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 PP2D1A8MPX8 630 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 ITGA4P13612 1032 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 AXLP30530 894 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 MLH1P40692 756 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 PADI6Q6TGC4 694 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 ZFP42Q96MM3 310 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 GAD1Q99259 594 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 USP20Q9Y2K6 914 aa25.21■■□□□ 1.63
TNFRSF25-218ENST00000510563 ARHGEF35A5YM69 484 aa25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 CLASP2O75122 1294 aaKnown RBP25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 EDN1P05305 212 aa25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 CCT6AP40227 531 aaKnown RBP25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 ANKRD54Q6NXT1 300 aa25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 TMEM184AQ6ZMB5 413 aa25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 DDX53Q86TM3 631 aaKnown RBP25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 MCPH1Q8NEM0 835 aa25.2■■□□□ 1.62
TNFRSF25-218ENST00000510563 RSPH1Q8WYR4 309 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms