RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ASAP2O43150 1006 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 CCDC22O60826 627 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 RAD23BP54727 409 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 PSMC1P62191 440 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 ROR1Q01973 937 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 NCAPHQ15003 741 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 EFTUD2Q15029 972 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEK1-206ENST00000510533 HEATR6Q6AI08 1181 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 RCSD1Q6JBY9 416 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 GIMAP8Q8ND71 665 aaPredicted RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 M0QYV0 167 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 P4HBP07237 508 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 FOXD4Q12950 439 aaPredicted RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 DYNC1I2Q13409 638 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 STXBP2Q15833 593 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 TRIM72Q6ZMU5 477 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 ENOSF1Q7L5Y1 443 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 STAG2Q8N3U4 1231 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 CEP95Q96GE4 821 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 OSBPL1AQ9BXW6 950 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 ADA2Q9NZK5 511 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 ABCB11O95342 1321 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 CFAP69A5D8W1 941 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 BNIP3LO60238 219 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 NFKBIAP25963 317 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 IFNA8P32881 189 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 HSPA9P38646 679 aaKnown RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 KCNB1Q14721 858 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 MTF1Q14872 753 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 MAGEB5Q9BZ81 275 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 KLC4Q9NSK0 619 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 SLC9A2Q9UBY0 812 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 PHKA2P46019 1235 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 GUCY1A3Q02108 690 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 SGMS1Q86VZ5 419 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 CDKL3Q8IVW4 592 aaPredicted RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 ICA1LQ8NDH6 482 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 SNX19Q92543 992 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 MTRQ99707 1265 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 HACD3Q9P035 362 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 HNRNPCL2B2RXH8 293 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 HNRNPCL1O60812 293 aaKnown RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 ANP32DO95626 131 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 SFNP31947 248 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 CRKP46108 304 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 BCAR1P56945 870 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 CAPRIN1Q14444 709 aaKnown RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 OLFM3Q96PB7 478 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 LMCD1Q9NZU5 365 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 AMACRQ9UHK6 382 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 SNX12Q9UMY4 172 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 HUS1O60921 280 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 FCER1AP12319 257 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 POU5F1BQ06416 359 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 FRMD5Q7Z6J6 570 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 LRRC1Q9BTT6 524 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 SLC13A1Q9BZW2 595 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 LIMA1Q9UHB6 759 aaKnown RBP11.25□□□□□ -0.61
NEK1-206ENST00000510533 STAP1Q9ULZ2 295 aa11.25□□□□□ -0.61
NEK1-206ENST00000510533 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
NEK1-206ENST00000510533 ARHGAP10A1A4S6 786 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
NEK1-206ENST00000510533 CACNB3P54284 484 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 STAT4Q14765 748 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 BFARQ9NZS9 450 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 KRT17Q04695 432 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
NEK1-206ENST00000510533 DPF2Q92785 391 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 CYP4F11Q9HBI6 524 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 PPP1R37O75864 691 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 STAT3P40763 770 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 AARSP49588 968 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEK1-206ENST00000510533 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 ANKRD40Q6AI12 368 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 CIAPIN1Q6FI81 312 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 LRRC31Q6UY01 552 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 SLC26A7Q8TE54 656 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.612e-7■■■■■ 32.7
NEK1-206ENST00000510533 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 MBD5Q9P267 1494 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 TDP2O95551 362 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 TRIM49P0CI25 452 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 TRIM49CP0CI26 452 aa11.24□□□□□ -0.61
NEK1-206ENST00000510533 FGFR4P22455 802 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms