RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 SYCE2Q6PIF2 218 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 OTUD6AQ7L8S5 288 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 ZNF710Q8N1W2 664 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 MRPS27Q92552 414 aaKnown RBP22.37■■□□□ 1.17
TRIO-215ENST00000510281 SNX27Q96L92 541 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 GCOM2Q9BZD3 368 aaPredicted RBP22.37■■□□□ 1.17
TRIO-215ENST00000510281 XPNPEP1Q9NQW7 623 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 PPME1Q9Y570 386 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 PCDHB6Q9Y5E3 794 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 COL4A3BPQ9Y5P4 624 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 CFAP54Q96N23 3096 aa22.37■■□□□ 1.17
TRIO-215ENST00000510281 MED24O75448 989 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 LYPLA2O95372 231 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 FGFR1P11362 822 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 ORC2Q13416 577 aaPredicted RBP22.36■■□□□ 1.17
TRIO-215ENST00000510281 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 ZNF410Q86VK4 478 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 C4orf32Q8N8J7 132 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 PIGOQ8TEQ8 1089 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 TMEM117Q9H0C3 514 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 IRF2BPLQ9H1B7 796 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 NGRNQ9NPE2 291 aaKnown RBP22.36■■□□□ 1.17
TRIO-215ENST00000510281 KIF3AQ9Y496 699 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 DMDP11532 3685 aa22.36■■□□□ 1.17
TRIO-215ENST00000510281 SPATA31C1P0DKV0 1188 aa22.35■■□□□ 1.17
TRIO-215ENST00000510281 HOXB8P17481 243 aaPredicted RBP22.35■■□□□ 1.17
TRIO-215ENST00000510281 AVPR2P30518 371 aa22.35■■□□□ 1.17
TRIO-215ENST00000510281 NUBP1P53384 320 aa22.35■■□□□ 1.17
TRIO-215ENST00000510281 PLPP4Q5VZY2 271 aa22.35■■□□□ 1.17
TRIO-215ENST00000510281 PRPF31Q8WWY3 499 aaKnown RBP22.35■■□□□ 1.17
TRIO-215ENST00000510281 PSPC1Q8WXF1 523 aaKnown RBP22.35■■□□□ 1.17
TRIO-215ENST00000510281 MTRQ99707 1265 aa22.35■■□□□ 1.17
TRIO-215ENST00000510281 PUF60Q9UHX1 559 aaKnown RBP22.35■■□□□ 1.17
TRIO-215ENST00000510281 SMC3Q9UQE7 1217 aa22.35■■□□□ 1.17
TRIO-215ENST00000510281 ZSCAN20P17040 1043 aaPredicted RBP22.34■■□□□ 1.17
TRIO-215ENST00000510281 RARRES1P49788 294 aa22.34■■□□□ 1.17
TRIO-215ENST00000510281 LRRC55Q6ZSA7 311 aa22.34■■□□□ 1.17
TRIO-215ENST00000510281 CATSPER3Q86XQ3 398 aa22.34■■□□□ 1.17
TRIO-215ENST00000510281 TCF25Q9BQ70 676 aa22.34■■□□□ 1.17
TRIO-215ENST00000510281 IFT122Q9HBG6 1241 aa22.34■■□□□ 1.17
TRIO-215ENST00000510281 RNF19AQ9NV58 838 aa22.34■■□□□ 1.17
TRIO-215ENST00000510281 HOXA2O43364 376 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 SRGAP2CP0DJJ0 459 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 PDIA4P13667 645 aaKnown RBP22.33■■□□□ 1.17
TRIO-215ENST00000510281 SFPQP23246 707 aaKnown RBP eCLIP22.33■■□□□ 1.17
TRIO-215ENST00000510281 PPM1AP35813 382 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 CDC42EP1Q00587 391 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 LAMTOR4Q0VGL1 99 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 POTEGQ6S5H5 508 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 ECHDC2Q86YB7 292 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 RNF169Q8NCN4 708 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 CASD1Q96PB1 797 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 TUFT1Q9NNX1 390 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 ANKEF1Q9NU02 776 aa22.33■■□□□ 1.17
TRIO-215ENST00000510281 ZFHX2Q9C0A1 2572 aaPredicted RBP22.32■■□□□ 1.16
TRIO-215ENST00000510281 HIDE1A8MVS5 230 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 H3BQV1 296 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 USO1O60763 962 aaKnown RBP22.32■■□□□ 1.16
TRIO-215ENST00000510281 MCM4P33991 863 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 PTGDRQ13258 359 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 KCNT2Q6UVM3 1135 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 CLEC17AQ6ZS10 378 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 FERMT3Q86UX7 667 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 LRRC43Q8N309 656 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 TCP11Q8WWU5 503 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 RIPOR3Q96MK2 946 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 CCDC43Q96MW1 224 aaKnown RBP22.32■■□□□ 1.16
TRIO-215ENST00000510281 MINDY3Q9H8M7 445 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 ENTPD7Q9NQZ7 604 aa22.32■■□□□ 1.16
TRIO-215ENST00000510281 PIN4Q9Y237 131 aaKnown RBP22.32■■□□□ 1.16
TRIO-215ENST00000510281 GAS2O43903 313 aaKnown RBP22.31■■□□□ 1.16
TRIO-215ENST00000510281 GFRA3O60609 400 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 CATSPER4Q7RTX7 472 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 EXOC8Q8IYI6 725 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 RNF149Q8NC42 400 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 ASAP3Q8TDY4 903 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 CASP10Q92851 521 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 ZNF558Q96NG5 402 aa22.31■■□□□ 1.16
TRIO-215ENST00000510281 POLR3CQ9BUI4 534 aaPredicted RBP22.31■■□□□ 1.16
TRIO-215ENST00000510281 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.31■■□□□ 1.16
TRIO-215ENST00000510281 GOLGA6L22H0YM25 854 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 DGAT1O75907 488 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 FXR2P51116 673 aaKnown RBP eCLIP22.3■■□□□ 1.163e-7■■■□□ 17.3
TRIO-215ENST00000510281 ECM1Q16610 540 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 NECTIN4Q96NY8 510 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 INO80BQ9C086 356 aaPredicted RBP22.3■■□□□ 1.16
TRIO-215ENST00000510281 GPRC5CQ9NQ84 441 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 FAM86C1Q9NVL1 165 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 NR2E1Q9Y466 385 aa22.3■■□□□ 1.16
TRIO-215ENST00000510281 A0A0U1RQF3 1178 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 PP2D1A8MPX8 630 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 PDGFBP01127 241 aaPredicted RBP22.29■■□□□ 1.16
TRIO-215ENST00000510281 RPA1P27694 616 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 KRT17Q04695 432 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 CAPSQ13938 189 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 IL17AQ16552 155 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 CLLU1OSQ5K130 101 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 TWF2Q6IBS0 349 aaKnown RBP22.29■■□□□ 1.16
TRIO-215ENST00000510281 LLGL2Q6P1M3 1020 aa22.29■■□□□ 1.16
TRIO-215ENST00000510281 MAEAQ7L5Y9 396 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms