RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 GLRA2P23416 452 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 RBM25P49756 843 aaKnown RBP20.25■□□□□ 0.83
CCND3-209ENST00000505884 RAB27AP51159 221 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 PTENP60484 403 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 NOSTRINQ8IVI9 506 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 PGBD4Q96DM1 585 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 TMEM169Q96HH4 297 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 C11orf16Q9NQ32 467 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 LZTS1Q9Y250 596 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 HES2Q9Y543 173 aa20.25■□□□□ 0.83
CCND3-209ENST00000505884 B4GALT5O43286 388 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 ZNF623O75123 536 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 ARL2P36404 184 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 MBTD1Q05BQ5 628 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 TFDP1Q14186 410 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 MXD4Q14582 209 aaPredicted RBP20.24■□□□□ 0.83
CCND3-209ENST00000505884 TMEM31Q5JXX7 168 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 RSAD1Q9HA92 442 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 CDH22Q9UJ99 828 aa20.24■□□□□ 0.83
CCND3-209ENST00000505884 USP15Q9Y4E8 981 aaPredicted RBP20.24■□□□□ 0.83
CCND3-209ENST00000505884 LRRIQ4A6NIV6 560 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 DDHD2O94830 711 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
CCND3-209ENST00000505884 CXCL14O95715 111 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 SSBP05455 408 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCND3-209ENST00000505884 GALTP07902 379 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
CCND3-209ENST00000505884 SLC11A1P49279 550 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 COASYQ13057 564 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 SMC1AQ14683 1233 aaKnown RBP20.23■□□□□ 0.83
CCND3-209ENST00000505884 PDE12Q6L8Q7 609 aaKnown RBP20.23■□□□□ 0.83
CCND3-209ENST00000505884 SMRP1Q8NCR6 262 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 SMG8Q8ND04 991 aaKnown RBP20.23■□□□□ 0.83
CCND3-209ENST00000505884 URGCPQ8TCY9 931 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 NGRNQ9NPE2 291 aaKnown RBP20.23■□□□□ 0.83
CCND3-209ENST00000505884 PRKAG3Q9UGI9 489 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 IPPQ9Y573 584 aa20.23■□□□□ 0.83
CCND3-209ENST00000505884 C2orf71A6NGG8 1288 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 EYA4O95677 639 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 ITGA4P13612 1032 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 LIG1P18858 919 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 RABEP1Q15276 862 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 ECM1Q16610 540 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 MRPL10Q7Z7H8 261 aaKnown RBP20.22■□□□□ 0.83
CCND3-209ENST00000505884 IGSF21Q96ID5 467 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 FAM193BQ96PV7 902 aaPredicted RBP20.22■□□□□ 0.83
CCND3-209ENST00000505884 TUFT1Q9NNX1 390 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 MUTYHQ9UIF7 546 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 NOL7Q9UMY1 257 aaKnown RBP20.22■□□□□ 0.83
CCND3-209ENST00000505884 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 PCDHB6Q9Y5E3 794 aa20.22■□□□□ 0.83
CCND3-209ENST00000505884 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 ARF4P18085 180 aaPredicted RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 CCT6AP40227 531 aaKnown RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 MLH1P40692 756 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 NOTUMQ6P988 496 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 C4orf32Q8N8J7 132 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 MRPL43Q8N983 215 aaKnown RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 ERMNQ8TAM6 284 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 RPGRIP1Q96KN7 1286 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 GAD1Q99259 594 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 CDCA3Q99618 268 aaPredicted RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 POLR3CQ9BUI4 534 aaPredicted RBP20.21■□□□□ 0.83
CCND3-209ENST00000505884 VN1R3Q9BXE9 311 aa20.21■□□□□ 0.83
CCND3-209ENST00000505884 ST18O60284 1047 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 NPTXRO95502 500 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 NCLP19338 710 aaKnown RBP20.2■□□□□ 0.82
CCND3-209ENST00000505884 AKAP5P24588 427 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
CCND3-209ENST00000505884 AMHR2Q16671 573 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 ANKRD54Q6NXT1 300 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 PADI6Q6TGC4 694 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 ZFP42Q96MM3 310 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 TRIM6Q9C030 488 aaPredicted RBP20.2■□□□□ 0.82
CCND3-209ENST00000505884 CSRNP2Q9H175 543 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 NXF3Q9H4D5 531 aaKnown RBP20.2■□□□□ 0.82
CCND3-209ENST00000505884 MIOSQ9NXC5 875 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
CCND3-209ENST00000505884 PRG3Q9Y2Y8 225 aaPredicted RBP20.2■□□□□ 0.82
CCND3-209ENST00000505884 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
CCND3-209ENST00000505884 ARHGEF35A5YM69 484 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 TTLL13PA6NNM8 815 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 PP2D1A8MPX8 630 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 DCXO43602 365 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
CCND3-209ENST00000505884 WEE2P0C1S8 567 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 XRCC6P12956 609 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCND3-209ENST00000505884 RPA1P27694 616 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 PTGDRQ13258 359 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 KCNC3Q14003 757 aa20.19■□□□□ 0.82
CCND3-209ENST00000505884 SYCE2Q6PIF2 218 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms