RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
NEDD9-210ENST00000505589 GAS2O43903 313 aaKnown RBP11.11□□□□□ -0.63
NEDD9-210ENST00000505589 FGFR4P22455 802 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 AXLP30530 894 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 SLC11A1P49279 550 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
NEDD9-210ENST00000505589 FUT2Q10981 343 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 LRCH2Q5VUJ6 765 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 KANK3Q6NY19 840 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 MRPL10Q7Z7H8 261 aaKnown RBP11.11□□□□□ -0.63
NEDD9-210ENST00000505589 KIAA2013Q8IYS2 634 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 CCDC136Q96JN2 1154 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 NELL2Q99435 816 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 COLEC11Q9BWP8 271 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 OSBPL6Q9BZF3 934 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 ZDHHC7Q9NXF8 308 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 SEPT9Q9UHD8 586 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-210ENST00000505589 NAP1L2Q9ULW6 460 aaPredicted RBP11.11□□□□□ -0.63
NEDD9-210ENST00000505589 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 KLF18A0A0U1RQI7 1052 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 INPPL1O15357 1258 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 MSH4O15457 936 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 ZNF862O60290 1169 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 LAMP2P13473 410 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 PFKPQ01813 784 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 PRKCQQ04759 706 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 Q4G0T1 1027 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 RSPO2Q6UXX9 243 aaPredicted RBP11.1□□□□□ -0.63
NEDD9-210ENST00000505589 OTUD6AQ7L8S5 288 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
NEDD9-210ENST00000505589 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 ATRIPQ8WXE1 791 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 SMG7Q92540 1137 aaKnown RBP11.1□□□□□ -0.63
NEDD9-210ENST00000505589 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 LPPQ93052 612 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 ZNF668Q96K58 619 aaPredicted RBP11.1□□□□□ -0.63
NEDD9-210ENST00000505589 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 RXFP1Q9HBX9 757 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 SH3GLB2Q9NR46 395 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 SLC2A4RGQ9NR83 387 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 DLL3Q9NYJ7 618 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 FBXO4Q9UKT5 387 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 CA14Q9ULX7 337 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
NEDD9-210ENST00000505589 CLUHO75153 1309 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 SPTBN4Q9H254 2564 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 SPTLC1O15269 473 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 LAMTOR5O43504 91 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 CHMP2AO43633 222 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 CSDE1O75534 798 aaKnown RBP11.09□□□□□ -0.63
NEDD9-210ENST00000505589 PAPLNO95428 1278 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEDD9-210ENST00000505589 SP9P0CG40 484 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 ITGA4P13612 1032 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
NEDD9-210ENST00000505589 OR1G1P47890 313 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 GLUD2P49448 558 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 STARD6P59095 220 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 PSMC5P62195 406 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 MTSS1LQ765P7 747 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 RTL10Q7L3V2 364 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 ZNF280BQ86YH2 543 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 FAM177A1Q8N128 213 aaPredicted RBP11.09□□□□□ -0.63
NEDD9-210ENST00000505589 CCDC51Q96ER9 411 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 HERC2P3Q9BVR0 1158 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 NT5C3AQ9H0P0 336 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 ARHGEF3Q9NR81 526 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 DNAJB4Q9UDY4 337 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 R4GN57 208 aa11.09□□□□□ -0.63
NEDD9-210ENST00000505589 C2CD2LO14523 706 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 NARSO43776 548 aaKnown RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 PSMD10O75832 226 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 DDHD2O94830 711 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 NLRP5P59047 1200 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 DSG1Q02413 1049 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 PPP2R5DQ14738 602 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
NEDD9-210ENST00000505589 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
NEDD9-210ENST00000505589 KIAA0319Q5VV43 1072 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms