RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RFX1P22670 979 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 SOX5P35711 763 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 CHMP4BP1P59074 171 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 C10orf76Q5T2E6 689 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 FBXO38Q6PIJ6 1188 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 GOLGA1Q92805 767 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 TMEM143Q96AN5 459 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 ZNF408Q9H9D4 720 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 USP20Q9Y2K6 914 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 SAR1BQ9Y6B6 198 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 SIP14410 1827 aa23.2■■□□□ 1.31
UBE2D3-216ENST00000503742 GARTP22102 1010 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 SCP2P22307 547 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 RFC5P40937 340 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 GCLMP48507 274 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 DRAP1Q14919 205 aaPredicted RBP23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 CELF3Q5SZQ8 465 aaKnown RBP23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 PHLDB3Q6NSJ2 640 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 CCDC62Q6P9F0 684 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 ASAP3Q8TDY4 903 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 RABGGTAQ92696 567 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 SAAL1Q96ER3 474 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 MFSD14AQ96MC6 490 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 LGR5O75473 907 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 GLRA2P23416 452 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 CETN1Q12798 172 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 SLC7A3Q8WY07 619 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 GPR20Q99678 358 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 TMEM117Q9H0C3 514 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 EFCC1Q9HA90 598 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 PUF60Q9UHX1 559 aaKnown RBP23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 JRKLQ9Y4A0 524 aa23.2■■□□□ 1.3
UBE2D3-216ENST00000503742 EVI5O60447 810 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 PNMA6AP0CW24 399 aaPredicted RBP23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 CETPP11597 493 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 NAMPTP43490 491 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 NAB2Q15742 525 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 WDR78Q5VTH9 848 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 ANKRD13CQ8N6S4 541 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 GPR161Q8N6U8 529 aaKnown RBP23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 PARD3BQ8TEW8 1205 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 PPME1Q9Y570 386 aa23.19■■□□□ 1.3
UBE2D3-216ENST00000503742 ATP8B3O60423 1300 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 HNRNPDLO14979 420 aaKnown RBP23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 GFPT2O94808 682 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 ENPEPQ07075 957 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 TEX35Q5T0J7 233 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 FMNL3Q8IVF7 1028 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 FBXO16Q8IX29 292 aaPredicted RBP23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 GPRC5AQ8NFJ5 357 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 OLIG1Q8TAK6 271 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 TMC2Q8TDI7 906 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 POMGNT1Q8WZA1 660 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 NAGPAQ9UK23 515 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 BTBD19C9JJ37 291 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 PDHXO00330 501 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 MXI1P50539 228 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 GTF2A2P52657 109 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 FKBP1BP68106 108 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 HSDL1Q3SXM5 330 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 FAM167AQ96KS9 214 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 NOX5Q96PH1 765 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 ALS2CR12Q96Q35 445 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 PACSIN1Q9BY11 444 aa23.18■■□□□ 1.3
UBE2D3-216ENST00000503742 BTNL10A8MVZ5 291 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 MAFO75444 373 aaPredicted RBP23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 KLRC1P26715 233 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 TUBB4BP68371 445 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 BMS1Q14692 1282 aaKnown RBP23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 KIAA0753Q2KHM9 967 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 GPD1LQ8N335 351 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 SYT11Q9BT88 431 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 STYXL1Q9Y6J8 313 aa23.17■■□□□ 1.3
UBE2D3-216ENST00000503742 ASB14A6NK59 587 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 LRRIQ3A6PVS8 624 aaPredicted RBP23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 PIGRP01833 764 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CCNA1P78396 465 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CYP24A1Q07973 514 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 VTI1AQ96AJ9 217 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 AZI2Q9H6S1 392 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 COQ4Q9Y3A0 265 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CCL15-CCL14A0A0B4J2E2 113 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CTAGE15A4D2H0 777 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 DDX3XO00571 662 aaKnown RBP eCLIP23.16■■□□□ 1.32e-17■■■■□ 23.8
UBE2D3-216ENST00000503742 LRRN2O75325 713 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CTAGE8P0CG41 777 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 ZSCAN20P17040 1043 aaPredicted RBP23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CCL15Q16663 113 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 ALKBH5Q6P6C2 394 aaKnown RBP23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 PLPPR4Q7Z2D5 763 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CTAGE6Q86UF2 777 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 VPS36Q86VN1 386 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 CTAGE4Q8IX94 777 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 SLC30A5Q8TAD4 765 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 BRI3BPQ8WY22 251 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 BBXQ8WY36 941 aaPredicted RBP23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 BICD1Q96G01 975 aa23.16■■□□□ 1.3
UBE2D3-216ENST00000503742 PLXNA1Q9UIW2 1896 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 SRGAP2O75044 1071 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 PRLRP16471 622 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms