RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 TBC1D5Q92609 795 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 NEK1Q96PY6 1258 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 PARD6BQ9BYG5 372 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 MAF1Q9H063 256 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 TNMDQ9H2S6 317 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 CLEC1BQ9P126 229 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 VPS18Q9P253 973 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 MRPL11Q9Y3B7 192 aaKnown RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 ATP6V1DQ9Y5K8 247 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 KAT6AQ92794 2004 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 PLXNA3P51805 1871 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ANKRD33BA6NCL7 494 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 LCE2BO14633 110 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 PER2O15055 1255 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ZBTB24O43167 697 aaPredicted RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 PDGFBP01127 241 aaPredicted RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 TUBB4AP04350 444 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 GOLGA8HP0CJ92 632 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 TGFB3P10600 412 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 GHRP10912 638 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ATF7P17544 494 aaPredicted RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 AK2P54819 239 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ZNF543Q08ER8 600 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 MTMR3Q13615 1198 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 CDC37Q16543 378 aaPredicted RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 CELF3Q5SZQ8 465 aaKnown RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 RSPH3Q86UC2 560 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 DHX40Q8IX18 779 aaKnown RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 KLHL23Q8NBE8 558 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 SPPL3Q8TCT6 385 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 KCNG4Q8TDN1 519 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 MIEF2Q96C03 454 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 C16orf70Q9BSU1 422 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 UBA5Q9GZZ9 404 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 PDE11AQ9HCR9 933 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ARFGAP3Q9NP61 516 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 PXMP2Q9NR77 195 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 DDX19AQ9NUU7 478 aaKnown RBP4.99□□□□□ -1.61
MATR3-202ENST00000502422 SETD4Q9NVD3 440 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 DNAI1Q9UI46 699 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.99□□□□□ -1.61
MATR3-202ENST00000502422 COL4A6Q14031 1691 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 MYH6P13533 1939 aa4.99□□□□□ -1.61
MATR3-202ENST00000502422 ENPP3O14638 875 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 DGKIO75912 1065 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 SMC2O95347 1197 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 ITGB1P05556 798 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 GGCXP38435 758 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 NOVP48745 357 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 GSDMDP57764 484 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 ARHGAP4P98171 946 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 BIRC2Q13490 618 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CAMK1Q14012 370 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 PAN2Q504Q3 1202 aaKnown RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 VPS53Q5VIR6 699 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 TSHZ3Q63HK5 1081 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 FAM173BQ6P4H8 233 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CPLX2Q6PUV4 134 aaKnown RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 DGLUCYQ7Z3D6 616 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 FRMD5Q7Z6J6 570 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 UBALD2Q8IYN6 164 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 PLPP7Q8NBV4 271 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 ZNF689Q96CS4 500 aaPredicted RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 PGBD1Q96JS3 809 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CLIC6Q96NY7 704 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 OSBPL7Q9BZF2 842 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 PLEKHA4Q9H4M7 779 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 VAT1LQ9HCJ6 419 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 ANO2Q9NQ90 1003 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 COL20A1Q9P218 1284 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 FAN1Q9Y2M0 1017 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 NR2E1Q9Y466 385 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 RIF1Q5UIP0 2472 aaKnown RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 FAM186AA6NE01 2351 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CACNA1HO95180 2353 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 ORC4O43929 436 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CAVIN2O95810 425 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 LGALS2P05162 132 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 LINC00271P0C7V0 271 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 STAG3L1P0CL83 205 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 IBSPP21815 317 aaPredicted RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 DNAJB1P25685 340 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 GJB2P29033 226 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 BEND6Q5SZJ8 279 aaPredicted RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 FBXW10Q5XX13 1052 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 KREMEN2Q8NCW0 462 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CDCA3Q99618 268 aaPredicted RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 HINFPQ9BQA5 517 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 APOL5Q9BWW9 433 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 CPVLQ9H3G5 476 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 VRTNQ9H8Y1 702 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 AAASQ9NRG9 546 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 TCP11L1Q9NUJ3 509 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 RBM28Q9NW13 759 aaKnown RBP4.98□□□□□ -1.61
MATR3-202ENST00000502422 MCM8Q9UJA3 840 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 ANAPC4Q9UJX5 808 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 LRFN2Q9ULH4 789 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 LIMCH1Q9UPQ0 1083 aa4.98□□□□□ -1.61
MATR3-202ENST00000502422 SORCS3Q9UPU3 1222 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms