RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SMTNP53814 917 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 TAP1Q03518 808 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 PRPF4BQ13523 1007 aaKnown RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 FAM187BQ17R55 369 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 PAN2Q504Q3 1202 aaKnown RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 CDR2LQ86X02 465 aaPredicted RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 MYCT1Q8N699 235 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 DDX12PQ92771 950 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 STAMQ92783 540 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 ZNF689Q96CS4 500 aaPredicted RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 TRAIPQ9BWF2 469 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 SEMA6BQ9H3T3 888 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 CUEDC2Q9H467 287 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 RC3H2Q9HBD1 1191 aaKnown RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 TSHZ2Q9NRE2 1034 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 KCNG1Q9UIX4 513 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 KCNH3Q9ULD8 1083 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 CNTNAP2Q9UHC6 1331 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 LAMA3Q16787 3333 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 A0A1B0GVL5 298 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 ACKR2O00590 384 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 CMA1P23946 247 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 BTG3Q14201 252 aaPredicted RBP18.47■□□□□ 0.55
PRKCB-210ENST00000498739 LONRF3Q496Y0 759 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 UBXN11Q5T124 520 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 FIBCD1Q8N539 461 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 SPIRE2Q8WWL2 714 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 CCDC51Q96ER9 411 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 TNMDQ9H2S6 317 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 CERS4Q9HA82 394 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 PARVGQ9HBI0 331 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 ARHGAP28Q9P2N2 729 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 USP20Q9Y2K6 914 aa18.47■□□□□ 0.55
PRKCB-210ENST00000498739 TTLL13PA6NNM8 815 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 TBKBP1A7MCY6 615 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 HOXA2O43364 376 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 EOMESO95936 686 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 EDN1P05305 212 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 PFKFB1P16118 471 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 ATF7P17544 494 aaPredicted RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 ZNF131P52739 623 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 NCKAP1LP55160 1127 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 SPRED2Q7Z698 418 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 ZNF598Q86UK7 904 aaKnown RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 CMTR2Q8IYT2 770 aaKnown RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 LPPQ93052 612 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 PYM1Q9BRP8 204 aaKnown RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 NTPCRQ9BSD7 190 aaKnown RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 EIF2AQ9BY44 585 aaKnown RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 TRIM6Q9C030 488 aaPredicted RBP18.46■□□□□ 0.55
PRKCB-210ENST00000498739 LRRC27Q9C0I9 530 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 TMEM134Q9H6X4 195 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 PCDHB2Q9Y5E7 798 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 COL4A6Q14031 1691 aa18.46■□□□□ 0.55
PRKCB-210ENST00000498739 TTC3P53804 2025 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 A0A1B0GUA9 196 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 K7ENM7 598 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 N4BP3O15049 544 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 TRAK2O60296 914 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 IDEP14735 1019 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 GRIN2CQ14957 1233 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 SLC27A1Q6PCB7 646 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 TAS1R3Q7RTX0 852 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 ABI1Q8IZP0 508 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 TMEM161BQ8NDZ6 487 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 ARNTL2Q8WYA1 636 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 DNAJC19Q96DA6 116 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 PGBD4Q96DM1 585 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 TGS1Q96RS0 853 aaKnown RBP18.45■□□□□ 0.54
PRKCB-210ENST00000498739 MAGEF1Q9HAY2 307 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 RNF19AQ9NV58 838 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 KBTBD4Q9NVX7 518 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 MTUS1Q9ULD2 1270 aa18.45■□□□□ 0.54
PRKCB-210ENST00000498739 A0A1W2PQ27 194 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 A0A1W2PQ64 194 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 A0A1W2PQD8 194 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 H0YCG3 227 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 ZNF623O75123 536 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 NPTXRO95502 500 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 MAPTP10636 758 aaKnown RBP18.44■□□□□ 0.54
PRKCB-210ENST00000498739 AMPD3Q01432 767 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 STRN3Q13033 797 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 NT5DC1Q5TFE4 455 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 HAUS6Q7Z4H7 955 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 SFR1Q86XK3 245 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 FAM178BQ8IXR5 827 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 CEP57L1Q8IYX8 460 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 FSIP1Q8NA03 581 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 SMG8Q8ND04 991 aaKnown RBP18.44■□□□□ 0.54
PRKCB-210ENST00000498739 CNNM3Q8NE01 707 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 HELQQ8TDG4 1101 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 MRPS27Q92552 414 aaKnown RBP18.44■□□□□ 0.54
PRKCB-210ENST00000498739 C17orf80Q9BSJ5 609 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 TMEM117Q9H0C3 514 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 PDZD7Q9H5P4 517 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 MTMR10Q9NXD2 777 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 SERTAD1Q9UHV2 236 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 HPSEQ9Y251 543 aa18.44■□□□□ 0.54
PRKCB-210ENST00000498739 IPPQ9Y573 584 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms