RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 MAP2K1Q02750 393 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 RBL2Q08999 1139 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 KCNA1Q09470 495 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 MFSD10Q14728 455 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 GRIK4Q16099 956 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 SNRNP35Q16560 246 aaKnown RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 CDCA2Q69YH5 1023 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 MTHFD1LQ6UB35 978 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 RSPH3Q86UC2 560 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 TRIM50Q86XT4 487 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 GPD1LQ8N335 351 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 C7orf31Q8N865 590 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 PCSK9Q8NBP7 692 aaKnown RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 RNF149Q8NC42 400 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 KIAA1524Q8TCG1 905 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 TMC2Q8TDI7 906 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 CPLX3Q8WVH0 158 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 SYN2Q92777 582 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 SCLT1Q96NL6 688 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 FNBP1Q96RU3 617 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 CEP89Q96ST8 783 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 MTG1Q9BT17 334 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 RNPEPQ9H4A4 650 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 PLCB1Q9NQ66 1216 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 RNF186Q9NXI6 227 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 CEP72Q9P209 647 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 SRRDQ9UH36 339 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 FBXL5Q9UKA1 691 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 AKT3Q9Y243 479 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 BZW2Q9Y6E2 419 aaKnown RBP9.21□□□□□ -0.94
SF3A1-210ENST00000498259 LRRC37A2A6NM11 1700 aa9.21□□□□□ -0.94
SF3A1-210ENST00000498259 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 SMIM35A0A1B0GVV1 85 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 INO80B-WBP1J3KQ70 363 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 M0QZ92 97 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ACKR2O00590 384 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 FKTNO75072 461 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 CABYRO75952 493 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 C22orf31O95567 290 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 HMGCRP04035 888 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 GYPCP04921 128 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 MYL3P08590 195 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 C6orf222P0C671 652 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ZNF286BP0CG31 522 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 CYLC1P35663 651 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ADKP55263 362 aaKnown RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 GJA9P57773 515 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 PTENP60484 403 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 IGBP1P78318 339 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 NKX3-2P78367 333 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 CDK17Q00537 523 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 PRPF4BQ13523 1007 aaKnown RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 CAPSQ13938 189 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 KIAA0753Q2KHM9 967 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 GNASQ5JWF2 1037 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 PRAMEF19Q5SWL8 479 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 TAF2Q6P1X5 1199 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 NFRKBQ6P4R8 1299 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 SRGAP1Q7Z6B7 1085 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 RNF180Q86T96 592 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 VPS36Q86VN1 386 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 CCDC170Q8IYT3 715 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 TC2NQ8N9U0 490 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 SLAIN1Q8ND83 568 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 FBXL18Q96ME1 805 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 NLRP4Q96MN2 994 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ZNF830Q96NB3 372 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 SPAG5Q96R06 1193 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ADPGKQ9BRR6 497 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 MSTO1Q9BUK6 570 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 SEZ6LQ9BYH1 1024 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 GCOM2Q9BZD3 368 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 KCND1Q9NSA2 647 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ABHD10Q9NUJ1 306 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 FLRT1Q9NZU1 646 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 AGO2Q9UKV8 859 aaKnown RBP9.2□□□□□ -0.94
SF3A1-210ENST00000498259 STYXL1Q9Y6J8 313 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 ZMYM2Q9UBW7 1377 aa9.2□□□□□ -0.94
SF3A1-210ENST00000498259 C17orf102A2RUQ5 167 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 GPR25O00155 361 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 OFD1O75665 1012 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 ERLIN2O94905 339 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 IGHA2P01877 340 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 PRKCBP05771 671 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 CCDC175P0C221 793 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 CYBAP13498 195 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 ANXA13P27216 316 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 FMO5P49326 533 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 VEGFBP49765 207 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 PSEN2P49810 448 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 MCCD1P59942 119 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-210ENST00000498259 KRT83P78385 493 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 MYL7Q01449 175 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 PRKCZQ05513 592 aa9.19□□□□□ -0.94
SF3A1-210ENST00000498259 NOLC1Q14978 699 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms