RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C1orf87Q8N0U7 546 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 STAG2Q8N3U4 1231 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ANKRD42Q8N9B4 389 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PLPP7Q8NBV4 271 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TGFBRAP1Q8WUH2 860 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 LRRC29Q8WV35 223 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 N4BP2L2Q92802 583 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 TBC1D31Q96DN5 1066 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RIOK1Q9BRS2 568 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 RTKNQ9BST9 563 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DNAI2Q9GZS0 605 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MRPL18Q9H0U6 180 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 NELFAQ9H3P2 528 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ASB6Q9NWX5 421 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FAM53CQ9NYF3 392 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CEP126Q9P2H0 1117 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ITGB1BP2Q9UKP3 347 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ICAM5Q9UMF0 924 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 COG5Q9UP83 839 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 NFS1Q9Y697 457 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FLNBO75369 2602 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 C15orf38-AP3S2A0A0A6YYH1 394 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 LOC100289279A0A1B0GTE1 492 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 A0A1W2PNR3 127 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RBM47A0AV96 593 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 SERINC4A6NH21 518 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 A6NJY4 79 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PPP1R12BO60237 982 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZC3H11AO75152 810 aaKnown RBP eCLIP1.6□□□□□ -2.157e-6■■■■■ 33.7
XRN1-214ENST00000498077 STAU1O95793 577 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 F2P00734 622 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 NBPF7P0C2Y1 421 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 CPA3P15088 417 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SFPQP23246 707 aaKnown RBP eCLIP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ACADLP28330 430 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PIK3CBP42338 1070 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PAFAH1B1P43034 410 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLC8A3P57103 927 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PLAURQ03405 335 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DDX10Q13206 875 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 NR1I3Q14994 352 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MAD2L1BPQ15013 274 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 PRKD1Q15139 912 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 PTPROQ16827 1216 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 VWA3BQ502W6 1294 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZMYM1Q5SVZ6 1142 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CCDC183Q5T5S1 534 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TDRD10Q5VZ19 366 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ANKRD40Q6AI12 368 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZNF793Q6ZN11 406 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CEP128Q6ZU80 1094 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 USP51Q70EK9 711 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RD3Q7Z3Z2 195 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CILP2Q8IUL8 1156 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TTC8Q8TAM2 541 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLC26A7Q8TE54 656 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ADAMTS15Q8TE58 950 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SMCR8Q8TEV9 937 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 HNRNPLLQ8WVV9 542 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 CUL5Q93034 780 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 WNT8BQ93098 351 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TP53INP1Q96A56 240 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MAGED4Q96JG8 741 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ARHGEF10LQ9HCE6 1279 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FRRS1LQ9P0K9 344 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SYNPO2Q9UMS6 1093 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZNF451Q9Y4E5 1061 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SNX13Q9Y5W8 968 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DUOX2Q9NRD8 1548 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZNF646O15015 1829 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 RGPD8O14715 1765 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 RGPD5Q99666 1765 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 NUP153P49790 1475 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ADGRL3Q9HAR2 1447 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 WDR64B1ANS9 1081 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SOX1O00570 391 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 CASC3O15234 703 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZSCAN12O43309 604 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 EIF5BO60841 1220 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 USP1O94782 785 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FSBPO95073 299 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 VIL1P09327 827 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 MSR1P21757 451 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FGFR4P22455 802 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SHMT1P34896 483 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PTDSS1P48651 473 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 PMS1P54277 932 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 GSTM4Q03013 218 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TBL3Q12788 808 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 CBLBQ13191 982 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PABPC4Q13310 644 aaKnown RBP eCLIP1.6□□□□□ -2.15
XRN1-214ENST00000498077 XP32Q5T750 250 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLC22A10Q63ZE4 541 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ALG1LQ6GMV1 187 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CCDC121Q6ZUS5 278 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 BBS12Q6ZW61 710 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SLFN12Q8IYM2 578 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 KDF1Q8NAX2 398 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 KIAA1524Q8TCG1 905 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms