RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 BMP4P12644 408 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 XRCC5P13010 732 aaKnown RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 NR2F2P24468 414 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 JAG1P78504 1218 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 CTBSQ01459 385 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 KIF5AQ12840 1032 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 PABPC4Q13310 644 aaKnown RBP eCLIP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 ZYXQ15942 572 aaKnown RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 SHROOM1Q2M3G4 852 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 SLC9C1Q4G0N8 1177 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 C10orf76Q5T2E6 689 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 RAD9BQ6WBX8 426 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 EPM2AIP1Q7L775 607 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 MIER3Q7Z3K6 550 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 USP37Q86T82 979 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 VPS36Q86VN1 386 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 SCFD1Q8WVM8 642 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 GOLGA1Q92805 767 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 HVCN1Q96D96 273 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 ALS2CR12Q96Q35 445 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 MPHOSPH6Q99547 160 aaKnown RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 REEP2Q9BRK0 252 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 OXCT2Q9BYC2 517 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 BHMT2Q9H2M3 363 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 KCTD10Q9H3F6 313 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 MMRN2Q9H8L6 949 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 ARMCX3Q9UH62 379 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 DBR1Q9UK59 544 aaKnown RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 ZNF215Q9UL58 517 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 MRFAP1Q9Y605 127 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 H0YCG3 227 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 N4BP1O75113 896 aaKnown RBP9.43□□□□□ -0.9
EPHA4-213ENST00000495693 GCNT3O95395 438 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 ARAFP10398 606 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 ALAS1P13196 640 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 VCAM1P19320 739 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 CCND2P30279 289 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 COPB2P35606 906 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 STAT3P40763 770 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 VAV2P52735 878 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 ZNF131P52739 623 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 SNAP25P60880 206 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 ERVK-24P63145 666 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 CETN1Q12798 172 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 MTMR1Q13613 665 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 PPP2R5AQ15172 486 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 ECM1Q16610 540 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 GNPTABQ3T906 1256 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 CCDC70Q6NSX1 233 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 RINT1Q6NUQ1 792 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 B3GNT9Q6UX72 402 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 RNF207Q6ZRF8 634 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 TRIM59Q8IWR1 403 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 FAM178BQ8IXR5 827 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-213ENST00000495693 TRIM58Q8NG06 486 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 UBE2Q2Q8WVN8 375 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 GPRASP2Q96D09 838 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 GBP3Q9H0R5 595 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 NHEJ1Q9H9Q4 299 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-213ENST00000495693 C17orf75Q9HAS0 396 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 LZTFL1Q9NQ48 299 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 PLCB1Q9NQ66 1216 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 HOXC10Q9NYD6 342 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-213ENST00000495693 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-213ENST00000495693 CDC23Q9UJX2 597 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 EXOC7Q9UPT5 735 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 SIK3Q9Y2K2 1263 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 FRMD4BQ9Y2L6 1034 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 UBIAD1Q9Y5Z9 338 aa9.43□□□□□ -0.9
EPHA4-213ENST00000495693 EP400Q96L91 3159 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 ZNF536O15090 1300 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 WDR64B1ANS9 1081 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 AKR1B10O60218 316 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 TACC1O75410 805 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 GFPT2O94808 682 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 SLITRK3O94933 977 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 LCA5LO95447 670 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 AFPP02771 609 aaKnown RBP9.42□□□□□ -0.9
EPHA4-213ENST00000495693 SERPING1P05155 500 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 LMNB1P20700 586 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
EPHA4-213ENST00000495693 QARSP47897 775 aaKnown RBP9.42□□□□□ -0.9
EPHA4-213ENST00000495693 CYP4A11Q02928 519 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 GOLGA8FQ08AF8 430 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 GOLGA8DPQ0D2H9 430 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 COG2Q14746 738 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
EPHA4-213ENST00000495693 ARSHQ5FYA8 562 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 ZNF569Q5MCW4 686 aa9.42□□□□□ -0.9
EPHA4-213ENST00000495693 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms