RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RAD9AQ99638 391 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 NTPCRQ9BSD7 190 aaKnown RBP21.42■■□□□ 1.02
HDAC4-212ENST00000495497 TNMDQ9H2S6 317 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 DACT1Q9NYF0 836 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 LRFN2Q9ULH4 789 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 PCDHB7Q9Y5E2 793 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 GOLGA6L4A6NEF3 574 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 K7ERI5 159 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 ACKR2O00590 384 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 GADD45BO75293 160 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-212ENST00000495497 CA3P07451 260 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 IDEP14735 1019 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 NMT1P30419 496 aaKnown RBP21.41■■□□□ 1.02
HDAC4-212ENST00000495497 SYKP43405 635 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 EFNA5P52803 228 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 SMTNP53814 917 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 NCKAP1LP55160 1127 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 HTRA4P83105 476 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-212ENST00000495497 PRPF4BQ13523 1007 aaKnown RBP21.41■■□□□ 1.02
HDAC4-212ENST00000495497 PCBP1Q15365 356 aaKnown RBP eCLIP21.41■■□□□ 1.02
HDAC4-212ENST00000495497 RAB30Q15771 203 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 FAM187BQ17R55 369 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 NT5DC1Q5TFE4 455 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 SFR1Q86XK3 245 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 CEP57L1Q8IYX8 460 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 TIFAQ96CG3 184 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 FIZ1Q96SL8 496 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 EIF2AQ9BY44 585 aaKnown RBP21.41■■□□□ 1.02
HDAC4-212ENST00000495497 BLZF1Q9H2G9 400 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 TBC1D7Q9P0N9 293 aa21.41■■□□□ 1.02
HDAC4-212ENST00000495497 A0A0U1RQF3 1178 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 TRAK2O60296 914 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 SLFN14P0C7P3 912 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 STAG3L1P0CL83 205 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 FGFR1P11362 822 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 ATF7P17544 494 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-212ENST00000495497 AXLP30530 894 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 NCBP1Q09161 790 aaKnown RBP21.4■■□□□ 1.02
HDAC4-212ENST00000495497 TMEM132AQ24JP5 1023 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 NOTUMQ6P988 496 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 FAM43BQ6ZT52 329 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-212ENST00000495497 LPPQ93052 612 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 PRIMPOLQ96LW4 560 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 YME1L1Q96TA2 773 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 PYM1Q9BRP8 204 aaKnown RBP21.4■■□□□ 1.02
HDAC4-212ENST00000495497 TRIM9Q9C026 710 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 TMEM134Q9H6X4 195 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 FAM105AQ9NUU6 356 aa21.4■■□□□ 1.02
HDAC4-212ENST00000495497 PHLPP2Q6ZVD8 1323 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 CNTNAP2Q9UHC6 1331 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 A0A1B0GUA9 196 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 K7ENM7 598 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 DGKIO75912 1065 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 NPTXRO95502 500 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 MAPTP10636 758 aaKnown RBP21.39■■□□□ 1.01
HDAC4-212ENST00000495497 AMPD3Q01432 767 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 CUL4BQ13620 913 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 HAUS6Q7Z4H7 955 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 SPRED2Q7Z698 418 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF598Q86UK7 904 aaKnown RBP21.39■■□□□ 1.01
HDAC4-212ENST00000495497 PAGE5Q96GU1 130 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 C7orf25Q9BPX7 421 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 LRRC27Q9C0I9 530 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 PDZD7Q9H5P4 517 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 ELAC1Q9H777 363 aaKnown RBP21.39■■□□□ 1.01
HDAC4-212ENST00000495497 MAGEF1Q9HAY2 307 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 RNF19AQ9NV58 838 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 PANK4Q9NVE7 773 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 TMEM161AQ9NX61 479 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 INSL6Q9Y581 213 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 PCDHB2Q9Y5E7 798 aa21.39■■□□□ 1.01
HDAC4-212ENST00000495497 MEIS3P2A8K0S8 358 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF202O95125 648 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 ASIC1P78348 528 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 PAN2Q504Q3 1202 aaKnown RBP21.38■■□□□ 1.01
HDAC4-212ENST00000495497 HERC4Q5GLZ8 1057 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-212ENST00000495497 EEF1DP3Q658K8 133 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 Q7L0L9 218 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 FAM178BQ8IXR5 827 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 SMG8Q8ND04 991 aaKnown RBP21.38■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF689Q96CS4 500 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-212ENST00000495497 TRAIPQ9BWF2 469 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 RC3H2Q9HBD1 1191 aaKnown RBP21.38■■□□□ 1.01
HDAC4-212ENST00000495497 KCNG1Q9UIX4 513 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 TTC3P53804 2025 aa21.38■■□□□ 1.01
HDAC4-212ENST00000495497 FRMD3A2A2Y4 597 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 GAP43P17677 238 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 CSPP1Q1MSJ5 1256 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 ZC2HC1CQ53FD0 456 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-212ENST00000495497 SLC27A1Q6PCB7 646 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 HPS3Q969F9 1004 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 FAM161BQ96MY7 647 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 TARS2Q9BW92 718 aaKnown RBP21.37■■□□□ 1.01
HDAC4-212ENST00000495497 FGFBP2Q9BYJ0 223 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 RNF39Q9H2S5 420 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 TTYH1Q9H313 450 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-212ENST00000495497 CERS4Q9HA82 394 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 SLC28A3Q9HAS3 691 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 HES2Q9Y543 173 aa21.37■■□□□ 1.01
HDAC4-212ENST00000495497 LINC01553A4QN01 128 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms