RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CDK5RAP3Q96JB5 506 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 C8orf48Q96LL4 319 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 CEP63Q96MT8 703 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 CGREF1Q99674 301 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 FSD1Q9BTV5 496 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 KLHL4Q9C0H6 718 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 NEUROG2Q9H2A3 272 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 ZFYVE28Q9HCC9 887 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 VTA1Q9NP79 307 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 CCDC177Q9NQR7 707 aaPredicted RBP4.32□□□□□ -1.72
ATG3-207ENST00000494571 GDF3Q9NR23 364 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 SERTAD1Q9UHV2 236 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 CTNND2Q9UQB3 1225 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 MAD1L1Q9Y6D9 718 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 CDC42BPAQ5VT25 1732 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 KNDC1Q76NI1 1749 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 CROCC2H7BZ55 1655 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 TRPM1Q7Z4N2 1603 aa4.32□□□□□ -1.72
ATG3-207ENST00000494571 LOC105371267A0A1B0GV96 52 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 hCG_1642624A0A1W2PR95 340 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 ANO9A1A5B4 782 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 FOXO6A8MYZ6 492 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 H0YGN5 161 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CBFA2T3O75081 653 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CTDNEP1O95476 244 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PABPC4LP0CB38 370 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 PABPC1P11940 636 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 PRKACAP17612 351 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 TCP1P17987 556 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 SERPINB6P35237 376 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 RFC1P35251 1148 aaPredicted RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 AP3M2P53677 418 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 ERVK-9P63128 1117 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 OCRLQ01968 901 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 SLC34A1Q06495 639 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 KRT31Q15323 416 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CNGA3Q16281 694 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 SLC27A3Q5K4L6 730 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 AGBL2Q5U5Z8 902 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CLEC4GQ6UXB4 293 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 LRIG3Q6UXM1 1119 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 NLRP10Q86W26 655 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 ZBED8Q8IZ13 594 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CACTIN-AS1Q8N1I8 211 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 AGGF1Q8N302 714 aaeCLIP4.31□□□□□ -1.72
ATG3-207ENST00000494571 CCDC82Q8N4S0 544 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 RAB3IL1Q8TBN0 382 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PIP4K2CQ8TBX8 421 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 RHPN1Q8TCX5 695 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PPP4R1Q8TF05 950 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 SH3TC2Q8TF17 1288 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CAPSLQ8WWF8 208 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 ATXN2LQ8WWM7 1075 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 MCUR1Q96AQ8 359 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 DGCR14Q96DF8 476 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 LTV1Q96GA3 475 aaPredicted RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 INPP4AQ96PE3 977 aaPredicted RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 AP1M1Q9BXS5 423 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 MRPL9Q9BYD2 267 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 MTMR12Q9C0I1 747 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 KLHL25Q9H0H3 589 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 EBF3Q9H4W6 596 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PLEKHA5Q9HAU0 1116 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 USP29Q9HBJ7 922 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 NLRC4Q9NPP4 1024 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 GID8Q9NWU2 228 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 COMMD8Q9NX08 183 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 UTP11Q9Y3A2 253 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 SLC12A7Q9Y666 1083 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 NFS1Q9Y697 457 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 RGPD3A6NKT7 1758 aaPredicted RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 RGPD4Q7Z3J3 1758 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 A0A0D9SFI3 127 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 MYOCOSA0A1B0GUC4 107 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 KIF28PB7ZC32 967 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CDK2AP1O14519 115 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 MCF2LO15068 1137 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 DAPK3O43293 454 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 ZNF862O60290 1169 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 ICMTO60725 284 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PLEKP08567 350 aaPredicted RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 TGFB3P10600 412 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CDH3P22223 829 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 GTF2H1P32780 548 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 PLCD1P51178 756 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 HSD17B4P51659 736 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 MRPS9P82933 396 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 DSG1Q02413 1049 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 KCNMA1Q12791 1236 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 STK4Q13043 487 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 MTMR3Q13615 1198 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 THOC5Q13769 683 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 TGFBIQ15582 683 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 KYNUQ16719 465 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 CWF19L2Q2TBE0 894 aaKnown RBP4.31□□□□□ -1.72
ATG3-207ENST00000494571 EDRF1Q3B7T1 1238 aa4.31□□□□□ -1.72
ATG3-207ENST00000494571 BBS9Q3SYG4 887 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms