RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 TTC38Q5R3I4 469 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 SRGAP1Q7Z6B7 1085 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 ZNF280BQ86YH2 543 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 SLC39A11Q8N1S5 342 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 C4orf32Q8N8J7 132 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 FAM184AQ8NB25 1140 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 BCL7CQ8WUZ0 217 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-219ENST00000494069 CPB2Q96IY4 423 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 MSLNLQ96KJ4 702 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 ZNF558Q96NG5 402 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 TCF25Q9BQ70 676 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 EIF2AQ9BY44 585 aaKnown RBP9.51□□□□□ -0.89
LRCH3-219ENST00000494069 FOXP1Q9H334 677 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-219ENST00000494069 NRDE2Q9H7Z3 1164 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-219ENST00000494069 ANKEF1Q9NU02 776 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 SPG21Q9NZD8 308 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 CD207Q9UJ71 328 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 PCDHB2Q9Y5E7 798 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 STK25O00506 426 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 ASAP2O43150 1006 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 B4GALT5O43286 388 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 TSPAN1O60635 241 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 USO1O60763 962 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 ZNF623O75123 536 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 DDHD2O94830 711 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 COL9A1P20849 921 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 PTENP60484 403 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 HMGN5P82970 282 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 ZP2Q05996 745 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 MBTD1Q05BQ5 628 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 AMHR2Q16671 573 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 PUS10Q3MIT2 529 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 NOMO2Q5JPE7 1267 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 MRPL10Q7Z7H8 261 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 CDR2LQ86X02 465 aaPredicted RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 NOSTRINQ8IVI9 506 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 EXOC8Q8IYI6 725 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 SMG8Q8ND04 991 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 TCP11Q8WWU5 503 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 AUTS2Q8WXX7 1259 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 GBP3Q9H0R5 595 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 POLR3FQ9H1D9 316 aaPredicted RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 POLD4Q9HCU8 107 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 C11orf16Q9NQ32 467 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 TBC1D13Q9NVG8 400 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 DNAJB4Q9UDY4 337 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 PUF60Q9UHX1 559 aaKnown RBP9.5□□□□□ -0.89
LRCH3-219ENST00000494069 HES2Q9Y543 173 aa9.5□□□□□ -0.89
LRCH3-219ENST00000494069 ARID2Q68CP9 1835 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 PI4K2BG5E9Z4 385 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 INO80B-WBP1J3KQ70 363 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 GAS2O43903 313 aaKnown RBP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 DGAT1O75907 488 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 GALTP07902 379 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 SKIP12755 728 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 XRCC6P12956 609 aaKnown RBP eCLIP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 SLC11A1P49279 550 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 SMAD4Q13485 552 aaKnown RBP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 KCNC3Q14003 757 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 MXD4Q14582 209 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 RABEP1Q15276 862 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 SMAD2Q15796 467 aaKnown RBP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 IL17AQ16552 155 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 LLGL2Q6P1M3 1020 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 GLB1LQ6UWU2 654 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 ADHFE1Q8IWW8 467 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 FEZF2Q8TBJ5 459 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 BSNDQ8WZ55 320 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 TMX3Q96JJ7 454 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 POLR3CQ9BUI4 534 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 APOL5Q9BWW9 433 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 VN1R3Q9BXE9 311 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 TUFT1Q9NNX1 390 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 ENTPD7Q9NQZ7 604 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 MIOSQ9NXC5 875 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 CDH22Q9UJ99 828 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 LZTS1Q9Y250 596 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 USP20Q9Y2K6 914 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-219ENST00000494069 PCDHB6Q9Y5E3 794 aa9.49□□□□□ -0.89
LRCH3-219ENST00000494069 C2orf71A6NGG8 1288 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 ERLIN2O94905 339 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 EYA4O95677 639 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 POMCP01189 267 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 ARF4P18085 180 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 U2AF2P26368 475 aaKnown RBP eCLIP9.48□□□□□ -0.897e-7■■■■■ 37
LRCH3-219ENST00000494069 PPM1AP35813 382 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 ALDH7A1P49419 539 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms