RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ENC1O14682 589 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 PMM2O15305 246 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 EVI5O60447 810 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 TACC1O75410 805 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 GFPT2O94808 682 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 CYP2C8P10632 490 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 ZSCAN20P17040 1043 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 GARTP22102 1010 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 TCF7P36402 384 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 ARL2P36404 184 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 STAT1P42224 750 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 GCLMP48507 274 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 DRAP1Q14919 205 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 ENOX2Q16206 610 aaKnown RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 SNRNP35Q16560 246 aaKnown RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 LNX1Q8TBB1 728 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 TMEM143Q96AN5 459 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 FAM167AQ96KS9 214 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 ALS2CR12Q96Q35 445 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 GPR20Q99678 358 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 STK33Q9BYT3 514 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 TMEM117Q9H0C3 514 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 LUC7LQ9NQ29 371 aaKnown RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 PUF60Q9UHX1 559 aaKnown RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 DDX41Q9UJV9 622 aaKnown RBP11.58□□□□□ -0.56
CLCN6-208ENST00000494028 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 SLC45A1Q9Y2W3 748 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 NCANO14594 1321 aa11.58□□□□□ -0.56
CLCN6-208ENST00000494028 BTNL10A8MVZ5 291 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 BTBD19C9JJ37 291 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 DDX3XO00571 662 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLCN6-208ENST00000494028 HNRNPDLO14979 420 aaKnown RBP11.57□□□□□ -0.56
CLCN6-208ENST00000494028 EDN1P05305 212 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 TGFB3P10600 412 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 KLRC1P26715 233 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 ABCD1P33897 745 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 CKAP4Q07065 602 aaKnown RBP11.57□□□□□ -0.56
CLCN6-208ENST00000494028 ENPEPQ07075 957 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 CYP24A1Q07973 514 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 CAPSQ13938 189 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 KIF22Q14807 665 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 LY6KQ17RY6 165 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 CELF3Q5SZQ8 465 aaKnown RBP11.57□□□□□ -0.56
CLCN6-208ENST00000494028 CCDC62Q6P9F0 684 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 KCNV1Q6PIU1 500 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 GPD1LQ8N335 351 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 BRI3BPQ8WY22 251 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 SEPT1Q8WYJ6 367 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 TOPORSQ9NS56 1045 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-208ENST00000494028 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 NAGPAQ9UK23 515 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 PPME1Q9Y570 386 aa11.57□□□□□ -0.56
CLCN6-208ENST00000494028 BZW2Q9Y6E2 419 aaKnown RBP11.57□□□□□ -0.56
CLCN6-208ENST00000494028 CCL15-CCL14A0A0B4J2E2 113 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 PDHXO00330 501 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 KIF3CO14782 793 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 CETPP11597 493 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 SCP2P22307 547 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 CNGA1P29973 690 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 STAT5BP51692 787 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 CLCN6P51797 869 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 FKBP1BP68106 108 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 NAB2Q15742 525 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 CCL15Q16663 113 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 BRDTQ58F21 947 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-208ENST00000494028 WDR78Q5VTH9 848 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 PHLDB3Q6NSJ2 640 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 ARMCX2Q7L311 632 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 ANKRD23Q86SG2 305 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 RNF10Q8N5U6 811 aaKnown RBP11.56□□□□□ -0.56
CLCN6-208ENST00000494028 MSANTD4Q8NCY6 345 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 SLC7A3Q8WY07 619 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 POMGNT1Q8WZA1 660 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 COPS5Q92905 334 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 SLC10A4Q96EP9 437 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 BICD1Q96G01 975 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 MFSD14AQ96MC6 490 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 NOX5Q96PH1 765 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLCN6-208ENST00000494028 EPC1Q9H2F5 836 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 GBA2Q9HCG7 927 aaPredicted RBP11.56□□□□□ -0.56
CLCN6-208ENST00000494028 TMEM8AQ9HCN3 771 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 ADAMTS1Q9UHI8 967 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 SNX12Q9UMY4 172 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 JRKLQ9Y4A0 524 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 HYOU1Q9Y4L1 999 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 PCDHGC5Q9Y5F6 944 aa11.56□□□□□ -0.56
CLCN6-208ENST00000494028 SAR1BQ9Y6B6 198 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms