RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 DTHD1Q6ZMT9 781 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 ALYREFQ86V81 257 aaKnown RBP13.57□□□□□ -0.24
UPF3A-210ENST00000493727 TRIM50Q86XT4 487 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 LINC00528Q8N1L1 170 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 SEPT1Q8WYJ6 367 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 UIMC1Q96RL1 719 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 SMARCAD1Q9H4L7 1026 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 ERAP1Q9NZ08 941 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
UPF3A-210ENST00000493727 TTC3P53804 2025 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 ZDBF2Q9HCK1 2354 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 VWA3AA6NCI4 1184 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 TBX3O15119 743 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 MSH4O15457 936 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 CTSHP09668 335 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 ARP10275 920 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 ALADP13716 330 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 KCNA2P16389 499 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 PRPHP41219 470 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 TXKP42681 527 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 TIGD5Q53EQ6 642 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 ARL6IP4Q66PJ3 421 aaKnown RBP13.56□□□□□ -0.24
UPF3A-210ENST00000493727 TMEM87AQ8NBN3 555 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 LENG9Q96B70 501 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 YME1L1Q96TA2 773 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 RAB34Q9BZG1 259 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 CACNA1HO95180 2353 aa13.56□□□□□ -0.24
UPF3A-210ENST00000493727 H3BQ06 376 aaPredicted RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 GAS7O60861 476 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 CUTAO60888 179 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 PTMSP20962 102 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 MCM4P33991 863 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 ZP2Q05996 745 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 PPFIA1Q13136 1202 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 PTPROQ16827 1216 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 GLG1Q92896 1179 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 CALR3Q96L12 384 aaKnown RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 MTMR9Q96QG7 549 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 TEKT3Q9BXF9 490 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 IFIH1Q9BYX4 1025 aaKnown RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 AGO4Q9HCK5 861 aaKnown RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 KCNMB3Q9NPA1 279 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 PCDHA7Q9UN72 937 aa13.55□□□□□ -0.24
UPF3A-210ENST00000493727 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 MORC2Q9Y6X9 1032 aaPredicted RBP13.55□□□□□ -0.24
UPF3A-210ENST00000493727 RRN3P2A6NIE6 340 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 H3BNC9 293 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
UPF3A-210ENST00000493727 IPO5O00410 1097 aaKnown RBP13.54□□□□□ -0.24
UPF3A-210ENST00000493727 DCXO43602 365 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 ATP9AO75110 1047 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 SKIP12755 728 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 TECP42680 631 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 GRIK4Q16099 956 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 HAS1Q92839 578 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 SLC5A5Q92911 643 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 GJA10Q969M2 543 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 PABPC5Q96DU9 382 aaKnown RBP13.54□□□□□ -0.24
UPF3A-210ENST00000493727 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 AZI2Q9H6S1 392 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
UPF3A-210ENST00000493727 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
UPF3A-210ENST00000493727 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
UPF3A-210ENST00000493727 EVPLQ92817 2033 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.53□□□□□ -0.24
UPF3A-210ENST00000493727 GSTTP1A0A1W2PQM5 241 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
UPF3A-210ENST00000493727 CHMP2AO43633 222 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 LONP1P36776 959 aaKnown RBP13.53□□□□□ -0.24
UPF3A-210ENST00000493727 TXLNAP40222 546 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 MRE11P49959 708 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 UBE2HP62256 183 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 NHLH1Q02575 133 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 TCEAL5Q5H9L2 206 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 NCAPH2Q6IBW4 605 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 RASSF8Q8NHQ8 419 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 CSRNP2Q9H175 543 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 RWDD3Q9Y3V2 267 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 CFAP54Q96N23 3096 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms