RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MED19A0JLT2 244 aaPredicted RBP14.73□□□□□ -0.05
HDAC3-213ENST00000492506 KRBA1A5PL33 1030 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 CARNS1A5YM72 827 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 ZNF623O75123 536 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 CNPP09543 421 aaKnown RBP14.73□□□□□ -0.05
HDAC3-213ENST00000492506 NOMO2Q5JPE7 1267 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 SKAP1Q86WV1 359 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 TMEM87AQ8NBN3 555 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 MYRIPQ8NFW9 859 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 GCOM2Q9BZD3 368 aaPredicted RBP14.73□□□□□ -0.05
HDAC3-213ENST00000492506 FAM105AQ9NUU6 356 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 IGSF9Q9P2J2 1179 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 WNT16Q9UBV4 365 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 FBXL21Q9UKT6 434 aa14.73□□□□□ -0.05
HDAC3-213ENST00000492506 KMT2BQ9UMN6 2715 aaPredicted RBP14.73□□□□□ -0.05
HDAC3-213ENST00000492506 TDRD15B5MCY1 1934 aaKnown RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 EPG5Q9HCE0 2579 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 A0A087WZ62 844 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 MSH4O15457 936 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 DDHD2O94830 711 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 AFF1P51825 1210 aaKnown RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 TBC1D8BQ0IIM8 1120 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 TWF2Q6IBS0 349 aaKnown RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 GLB1LQ6UWU2 654 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 CREBRFQ8IUR6 639 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 REXO1Q8N1G1 1221 aaKnown RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 CMASQ8NFW8 434 aaPredicted RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 RSAD2Q8WXG1 361 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 SCLT1Q96NL6 688 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 FDXACB1Q9BRP7 624 aaPredicted RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 NIFKQ9BYG3 293 aaKnown RBP14.72□□□□□ -0.05
HDAC3-213ENST00000492506 TSPYL1Q9H0U9 437 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 SEMA4AQ9H3S1 761 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 TCEAL9Q9UHQ7 104 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 INPP5FQ9Y2H2 1132 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 MIA3Q5JRA6 1907 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 MYH15Q9Y2K3 1946 aa14.72□□□□□ -0.05
HDAC3-213ENST00000492506 CACNA1BQ00975 2339 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 TMEM150BA6NC51 233 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 GOLGA8AA7E2F4 631 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 GOLGA8BA8MQT2 603 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 LMNAP02545 664 aaKnown RBP14.71□□□□□ -0.05
HDAC3-213ENST00000492506 CFHP08603 1231 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 SKIP12755 728 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 CDK11BP21127 795 aaKnown RBP14.71□□□□□ -0.05
HDAC3-213ENST00000492506 KLRC2P26717 231 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 ADD1P35611 737 aaKnown RBP14.71□□□□□ -0.05
HDAC3-213ENST00000492506 RCAN1P53805 252 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 CDC42EP1Q00587 391 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 RNASELQ05823 741 aaKnown RBP14.71□□□□□ -0.05
HDAC3-213ENST00000492506 AGMOQ6ZNB7 445 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 DHX32Q7L7V1 743 aaKnown RBP14.71□□□□□ -0.05
HDAC3-213ENST00000492506 SLC5A5Q92911 643 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 GJA10Q969M2 543 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 RIT2Q99578 217 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 EMILIN2Q9BXX0 1053 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 RHOBTB2Q9BYZ6 727 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 GBP3Q9H0R5 595 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 UNC45AQ9H3U1 944 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 PIN4Q9Y237 131 aaKnown RBP14.71□□□□□ -0.05
HDAC3-213ENST00000492506 R4GN57 208 aa14.71□□□□□ -0.05
HDAC3-213ENST00000492506 KLF18A0A0U1RQI7 1052 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 PAPLNO95428 1278 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 EFEMP2O95967 443 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 SSBP05455 408 aaKnown RBP eCLIP14.7□□□□□ -0.06
HDAC3-213ENST00000492506 SFPQP23246 707 aaKnown RBP eCLIP14.7□□□□□ -0.06
HDAC3-213ENST00000492506 ADCK5Q3MIX3 580 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 B3GNT9Q6UX72 402 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 ZNF410Q86VK4 478 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 KSR1Q8IVT5 923 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 SLC44A3Q8N4M1 653 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 SH2D3AQ9BRG2 576 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 C6orf50Q9HD87 102 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 WDR6Q9NNW5 1121 aaKnown RBP14.7□□□□□ -0.06
HDAC3-213ENST00000492506 MAN1C1Q9NR34 630 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 DLGAP2Q9P1A6 1054 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 EPS15L1Q9UBC2 864 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 PATJQ8NI35 1801 aa14.7□□□□□ -0.06
HDAC3-213ENST00000492506 GPR179Q6PRD1 2367 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 CHMP2AO43633 222 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 SFNP31947 248 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 RAB27AP51159 221 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 JAK3P52333 1124 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 TSGA10IPQ3SY00 556 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 MTERF2Q49AM1 385 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 POTEGQ6S5H5 508 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 MRPL10Q7Z7H8 261 aaKnown RBP14.69□□□□□ -0.06
HDAC3-213ENST00000492506 KIAA2013Q8IYS2 634 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 RNF168Q8IYW5 571 aaPredicted RBP14.69□□□□□ -0.06
HDAC3-213ENST00000492506 RASEFQ8IZ41 740 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 KCNG4Q8TDN1 519 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 MYADMQ96S97 322 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 TMEM175Q9BSA9 504 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 IFT122Q9HBG6 1241 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 ANO2Q9NQ90 1003 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 MRPL17Q9NRX2 175 aaKnown RBP14.69□□□□□ -0.06
HDAC3-213ENST00000492506 SUCLA2Q9P2R7 463 aaPredicted RBP14.69□□□□□ -0.06
HDAC3-213ENST00000492506 STK39Q9UEW8 545 aa14.69□□□□□ -0.06
HDAC3-213ENST00000492506 SEPT9Q9UHD8 586 aaPredicted RBP14.69□□□□□ -0.06
HDAC3-213ENST00000492506 PCDHB2Q9Y5E7 798 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms