RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 SRFP11831 508 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 KRT32Q14532 448 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 NTRK3Q16288 839 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 KSR1Q8IVT5 923 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 ZBTB44Q8NCP5 570 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 COL26A1Q96A83 441 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 FDXACB1Q9BRP7 624 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-214ENST00000491390 TEKT3Q9BXF9 490 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 SFXN1Q9H9B4 322 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 PARD6AQ9NPB6 346 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 FBXO4Q9UKT5 387 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 BPTFQ12830 3046 aa12.48□□□□□ -0.41
NCSTN-214ENST00000491390 SMG1Q96Q15 3661 aaKnown RBP12.48□□□□□ -0.41
NCSTN-214ENST00000491390 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 PATJQ8NI35 1801 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 CCDC196A0A1B0GTZ2 297 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.47□□□□□ -0.41
NCSTN-214ENST00000491390 B4GALT3O60512 393 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 LILRB5O75023 590 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 STBD1O95210 358 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 GNA11P29992 359 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 RCAN1P53805 252 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
NCSTN-214ENST00000491390 TARBP2Q15633 366 aaKnown RBP12.47□□□□□ -0.41
NCSTN-214ENST00000491390 LETM2Q2VYF4 491 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 PPM1JQ5JR12 505 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 PLA2G4FQ68DD2 849 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 C15orf39Q6ZRI6 1047 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 VPS52Q8N1B4 723 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
NCSTN-214ENST00000491390 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 ARHGEF3Q9NR81 526 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 CA14Q9ULX7 337 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 SMG5Q9UPR3 1016 aaKnown RBP12.47□□□□□ -0.41
NCSTN-214ENST00000491390 C2orf16Q68DN1 1984 aa12.47□□□□□ -0.41
NCSTN-214ENST00000491390 STK25O00506 426 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 SLC30A4O14863 429 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 SSBP05455 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
NCSTN-214ENST00000491390 MYBP10242 640 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.41
NCSTN-214ENST00000491390 NLRP5P59047 1200 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 TWF2Q6IBS0 349 aaKnown RBP12.46□□□□□ -0.41
NCSTN-214ENST00000491390 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 RHPN2Q8IUC4 686 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 GPR152Q8TDT2 470 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 TMEM169Q96HH4 297 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 CHAMP1Q96JM3 812 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 NLRP4Q96MN2 994 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 AIFM3Q96NN9 605 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 CEP89Q96ST8 783 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 VN1R3Q9BXE9 311 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 RHOBTB2Q9BYZ6 727 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 GCOM2Q9BZD3 368 aaPredicted RBP12.46□□□□□ -0.41
NCSTN-214ENST00000491390 NRDE2Q9H7Z3 1164 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
NCSTN-214ENST00000491390 DNAJB4Q9UDY4 337 aa12.46□□□□□ -0.41
NCSTN-214ENST00000491390 PIN4Q9Y237 131 aaKnown RBP12.46□□□□□ -0.41
NCSTN-214ENST00000491390 HELZ2Q9BYK8 2649 aaKnown RBP12.46□□□□□ -0.42
NCSTN-214ENST00000491390 DMXL2Q8TDJ6 3036 aa12.46□□□□□ -0.42
NCSTN-214ENST00000491390 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 PSMD10O75832 226 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 PAPLNO95428 1278 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 CTSAP10619 480 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 PHKA2P46019 1235 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 JAK3P52333 1124 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 POLGP54098 1239 aaPredicted RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 STARD6P59095 220 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 SHC2P98077 582 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 CABP7Q86V35 215 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 CMASQ8NFW8 434 aaPredicted RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 KCNB2Q92953 911 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 NXPE3Q969Y0 559 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 RIT2Q99578 217 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 DDX23Q9BUQ8 820 aaKnown RBP12.45□□□□□ -0.42
NCSTN-214ENST00000491390 SLC2A4RGQ9NR83 387 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
NCSTN-214ENST00000491390 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms