RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 POLR2DO15514 142 aaKnown RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 LZTS3O60299 673 aaPredicted RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 GHRP10912 638 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 ZNF76P36508 570 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 TXKP42681 527 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 STAT5BP51692 787 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 ACTR2P61160 394 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 ITGB3BPQ13352 177 aaPredicted RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 LPIN1Q14693 890 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 PLCB4Q15147 1175 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 AAK1Q2M2I8 961 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 LONRF3Q496Y0 759 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 PRR16Q569H4 304 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 TAF2Q6P1X5 1199 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 LRSAM1Q6UWE0 723 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 KRBA2Q6ZNG9 492 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 RPAINQ86UA6 219 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 RSPH3Q86UC2 560 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 CKAP2LQ8IYA6 745 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 IGSF22Q8N9C0 903 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 ETNPPLQ8TBG4 499 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 STK32AQ8WU08 396 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 APBB2Q92870 758 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 GJA10Q969M2 543 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 MRGPRX2Q96LB1 330 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 AK8Q96MA6 479 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 NECAB3Q96P71 396 aaPredicted RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 UIMC1Q96RL1 719 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 UHRF1Q96T88 793 aaPredicted RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 SDF4Q9BRK5 362 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 FUCA2Q9BTY2 467 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 IFIH1Q9BYX4 1025 aaKnown RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 PANK2Q9BZ23 570 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 CCSER1Q9C0I3 900 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 AZI2Q9H6S1 392 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 AGO4Q9HCK5 861 aaKnown RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 SERTAD1Q9UHV2 236 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 TUBE1Q9UJT0 475 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
CLDN1-202ENST00000490800 COG5Q9UP83 839 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 USTQ9Y2C2 406 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 REV3LO60673 3130 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 TRANK1O15050 2925 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 MBLAC1A4D2B0 266 aaPredicted RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 RRN3P2A6NIE6 340 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 DDX39AO00148 427 aaKnown RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 TBX3O15119 743 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 MSH4O15457 936 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 CDC25AP30304 524 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 TECP42680 631 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 MGAT3Q09327 533 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 TMEM62Q0P6H9 643 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 FOXC1Q12948 553 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 PDIA5Q14554 519 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 TMEM266Q2M3C6 531 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 PLPPR4Q7Z2D5 763 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 ELOA2Q8IYF1 753 aaPredicted RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 PDILTQ8N807 584 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 TRAPPC12Q8WVT3 735 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 YME1L1Q96TA2 773 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 MMTAG2Q9BU76 263 aaKnown RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 FAM49AQ9H0Q0 323 aaPredicted RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 TTC12Q9H892 705 aaPredicted RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 USP25Q9UHP3 1055 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 ZMIZ1Q9ULJ6 1067 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 CDY2AQ9Y6F7 541 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 NFASCO94856 1347 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 PRRC2BQ5JSZ5 2229 aaKnown RBP8.42□□□□□ -1.06
CLDN1-202ENST00000490800 MUC3AQ02505 3323 aa8.42□□□□□ -1.06
CLDN1-202ENST00000490800 DOCK5Q9H7D0 1870 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 DHX15O43143 795 aaKnown RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 MARCH6O60337 910 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 CCNE2O96020 404 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 CD52P31358 61 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 TXLNAP40222 546 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 UBA7P41226 1012 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 MRPS6P82932 125 aaKnown RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 TYRO3Q06418 890 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 PDE4CQ08493 712 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 GPM6BQ13491 265 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 KARSQ15046 597 aaKnown RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 EPC2Q52LR7 807 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 FBXO47Q5MNV8 452 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 IER5Q5VY09 327 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 SWSAP1Q6NVH7 229 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 MTHFD1LQ6UB35 978 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 ABHD15Q6UXT9 468 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 NIPA1Q7RTP0 329 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 RTN4RL1Q86UN2 441 aaPredicted RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 CABP7Q86V35 215 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 TMEM192Q8IY95 271 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 CNNM3Q8NE01 707 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 LRRC15Q8TF66 581 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 ERCC4Q92889 916 aaPredicted RBP8.41□□□□□ -1.06
CLDN1-202ENST00000490800 DHX58Q96C10 678 aa8.41□□□□□ -1.06
CLDN1-202ENST00000490800 FAM20AQ96MK3 541 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms