RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 B4GALT5O43286 388 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 B4GALT3O60512 393 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 OFD1O75665 1012 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 SMC1AQ14683 1233 aaKnown RBP11.5□□□□□ -0.57
RBM39-236ENST00000490484 HAUS3Q68CZ6 603 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 LLGL2Q6P1M3 1020 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 NOTUMQ6P988 496 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 AGMOQ6ZNB7 445 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 ADHFE1Q8IWW8 467 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 SMRP1Q8NCR6 262 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 URGCPQ8TCY9 931 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 TMEM169Q96HH4 297 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 TMX3Q96JJ7 454 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
RBM39-236ENST00000490484 POLR3CQ9BUI4 534 aaPredicted RBP11.5□□□□□ -0.57
RBM39-236ENST00000490484 C1QTNF1Q9BXJ1 281 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 EIF2AQ9BY44 585 aaKnown RBP11.5□□□□□ -0.57
RBM39-236ENST00000490484 NRDE2Q9H7Z3 1164 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 NGRNQ9NPE2 291 aaKnown RBP11.5□□□□□ -0.57
RBM39-236ENST00000490484 DNAJB4Q9UDY4 337 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 IPPQ9Y573 584 aa11.5□□□□□ -0.57
RBM39-236ENST00000490484 FSD2A1L4K1 749 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 ARHGEF35A5YM69 484 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 FAM86C2PA6NEL3 165 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 LRRIQ4A6NIV6 560 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 POMCP01189 267 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 SRGAP2BP0DMP2 458 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 U2AF2P26368 475 aaKnown RBP eCLIP11.49□□□□□ -0.572e-9■□□□□ 11
RBM39-236ENST00000490484 RPA1P27694 616 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 CCT6AP40227 531 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 MLH1P40692 756 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 TOB1P50616 345 aaPredicted RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.575e-6■□□□□ 9.5
RBM39-236ENST00000490484 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 COASYQ13057 564 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.57
RBM39-236ENST00000490484 MCTP1Q6DN14 999 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 SMG8Q8ND04 991 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 BCL7CQ8WUZ0 217 aaPredicted RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 CCDC51Q96ER9 411 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 NACC1Q96RE7 527 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 POP1Q99575 1024 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 APOL6Q9BWW8 343 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 TRIM6Q9C030 488 aaPredicted RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 NXF3Q9H4D5 531 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 USP15Q9Y4E8 981 aaPredicted RBP11.49□□□□□ -0.57
RBM39-236ENST00000490484 HES2Q9Y543 173 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 PCDHB6Q9Y5E3 794 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 CNTNAP2Q9UHC6 1331 aa11.49□□□□□ -0.57
RBM39-236ENST00000490484 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.48□□□□□ -0.57
RBM39-236ENST00000490484 C2orf71A6NGG8 1288 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 EYA4O95677 639 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 XRCC6P12956 609 aaKnown RBP eCLIP11.48□□□□□ -0.573e-9■■□□□ 12.4
RBM39-236ENST00000490484 ITGA4P13612 1032 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 ARF4P18085 180 aaPredicted RBP11.48□□□□□ -0.57
RBM39-236ENST00000490484 NCLP19338 710 aaKnown RBP11.48□□□□□ -0.57
RBM39-236ENST00000490484 COL9A1P20849 921 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 GJB2P29033 226 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 AXLP30530 894 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 SLC11A1P49279 550 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 PTGDRQ13258 359 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 AMHR2Q16671 573 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 MRPL10Q7Z7H8 261 aaKnown RBP11.48□□□□□ -0.57
RBM39-236ENST00000490484 CDR2LQ86X02 465 aaPredicted RBP11.48□□□□□ -0.57
RBM39-236ENST00000490484 ZNF280BQ86YH2 543 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 VPS52Q8N1B4 723 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 AUTS2Q8WXX7 1259 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 IGSF21Q96ID5 467 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
RBM39-236ENST00000490484 APOL5Q9BWW9 433 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 ZBP1Q9H171 429 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 CSRNP2Q9H175 543 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 RAPGEFL1Q9UHV5 662 aa11.48□□□□□ -0.57
RBM39-236ENST00000490484 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 PP2D1A8MPX8 630 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 H3BQV1 296 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 DDHD2O94830 711 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 NPTXRO95502 500 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 GALTP07902 379 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 ECM1Q16610 540 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 CDCA2Q69YH5 1023 aaPredicted RBP11.47□□□□□ -0.57
RBM39-236ENST00000490484 ANKRD54Q6NXT1 300 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 ZBTB8OSQ8IWT0 167 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 C4orf32Q8N8J7 132 aa11.47□□□□□ -0.57
RBM39-236ENST00000490484 MRPL43Q8N983 215 aaKnown RBP11.47□□□□□ -0.57
RBM39-236ENST00000490484 CNNM3Q8NE01 707 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms