RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 ZNF623O75123 536 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 ERLIN2O94905 339 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 CXCL14O95715 111 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 CYP4A11Q02928 519 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 LAMTOR4Q0VGL1 99 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 NR5A1Q13285 461 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 GIT2Q14161 759 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 CTTNQ14247 550 aaKnown RBP12.55□□□□□ -0.4
DUBR-204ENST00000490441 CALCRLQ16602 461 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 CES5AQ6NT32 575 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 HFE2Q6ZVN8 426 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 TPH2Q8IWU9 490 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 RNF149Q8NC42 400 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 EDAQ92838 391 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 GTF3C6Q969F1 213 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 FAM193BQ96PV7 902 aaPredicted RBP12.55□□□□□ -0.4
DUBR-204ENST00000490441 MTRQ99707 1265 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 IFT122Q9HBG6 1241 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 TBC1D13Q9NVG8 400 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 WRAP73Q9P2S5 460 aaPredicted RBP12.55□□□□□ -0.4
DUBR-204ENST00000490441 PCDHB2Q9Y5E7 798 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 HCFC2Q9Y5Z7 792 aa12.55□□□□□ -0.4
DUBR-204ENST00000490441 ZNF318Q5VUA4 2279 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 OFD1O75665 1012 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 FOSBP53539 338 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
DUBR-204ENST00000490441 KCNC3Q14003 757 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 TFDP1Q14186 410 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 MXD4Q14582 209 aaPredicted RBP12.54□□□□□ -0.4
DUBR-204ENST00000490441 ME3Q16798 604 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 EARS2Q5JPH6 523 aaKnown RBP12.54□□□□□ -0.4
DUBR-204ENST00000490441 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
DUBR-204ENST00000490441 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 IGSF21Q96ID5 467 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 NECTIN4Q96NY8 510 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 S1PR5Q9H228 398 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 KCNH6Q9H252 994 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 STK39Q9UEW8 545 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 PCDHA12Q9UN75 941 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
DUBR-204ENST00000490441 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 M0R296 226 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 NEMFO60524 1076 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 CLASP2O75122 1294 aaKnown RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 GALTP07902 379 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 FDPSP14324 419 aaKnown RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 NEK4P51957 841 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 ZXDAP98168 799 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 ITIH3Q06033 890 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 PCBP1Q15365 356 aaKnown RBP eCLIP12.53□□□□□ -0.4
DUBR-204ENST00000490441 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
DUBR-204ENST00000490441 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 NSUN7Q8NE18 718 aaKnown RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 EIF2AK1Q9BQI3 630 aaKnown RBP12.53□□□□□ -0.4
DUBR-204ENST00000490441 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 DZANK1Q9NVP4 752 aa12.53□□□□□ -0.4
DUBR-204ENST00000490441 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 DGAT1O75907 488 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 SLITRK3O94933 977 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 LARGE1O95461 756 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 CTSAP10619 480 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 ITGA4P13612 1032 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
DUBR-204ENST00000490441 AXLP30530 894 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 TXKP42681 527 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 SLC11A1P49279 550 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 AGMOQ6ZNB7 445 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 MRPL10Q7Z7H8 261 aaKnown RBP12.52□□□□□ -0.41
DUBR-204ENST00000490441 PPFIBP1Q86W92 1011 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 HACE1Q8IYU2 909 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 AUTS2Q8WXX7 1259 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 CCDC51Q96ER9 411 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 RIPOR3Q96MK2 946 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 TTC12Q9H892 705 aaPredicted RBP12.52□□□□□ -0.41
DUBR-204ENST00000490441 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.41
DUBR-204ENST00000490441 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms