RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 MYH11P35749 1972 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 XIRP2A4UGR9 3374 aa15.87■□□□□ 0.13
SRGAP3-208ENST00000490348 CNTNAP2Q9UHC6 1331 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 FRMD3A2A2Y4 597 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 PRKCBP05771 671 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 KRT18P05783 430 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 CA3P07451 260 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 IBSPP21815 317 aaPredicted RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 CASP1P29466 404 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 GATMP50440 423 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 NCKAP1LP55160 1127 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 MAPK6Q16659 721 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 TWF2Q6IBS0 349 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 ZNF598Q86UK7 904 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 CDR2LQ86X02 465 aaPredicted RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 ECHDC2Q86YB7 292 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 NPAS4Q8IUM7 802 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 GRAMD1CQ8IYS0 662 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 MRPS27Q92552 414 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 ZNF689Q96CS4 500 aaPredicted RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 EIF2AQ9BY44 585 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 TRIM9Q9C026 710 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 NKX2-4Q9H2Z4 354 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 RNF19AQ9NV58 838 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 PRMT7Q9NVM4 692 aaPredicted RBP15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 SERTAD1Q9UHV2 236 aa15.86■□□□□ 0.13
SRGAP3-208ENST00000490348 A0A1B0GUA9 196 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 MEIS3P2A8K0S8 358 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 ACKR2O00590 384 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 DGKIO75912 1065 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM13AO94988 1023 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 SLFN14P0C7P3 912 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 MAPTP10636 758 aaKnown RBP15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 LIG1P18858 919 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 EFNA5P52803 228 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 RAB30Q15771 203 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 NT5DC1Q5TFE4 455 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 MYCT1Q8N699 235 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 TIFAQ96CG3 184 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 PRIMPOLQ96LW4 560 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 ZBED2Q9BTP6 218 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 TTYH1Q9H313 450 aaPredicted RBP15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 FAM105AQ9NUU6 356 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 DACT1Q9NYF0 836 aa15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 LARSQ9P2J5 1176 aaKnown RBP15.85■□□□□ 0.13
SRGAP3-208ENST00000490348 PHLPP2Q6ZVD8 1323 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 K7ERI5 159 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 TBCAO75347 108 aaKnown RBP15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 FGFR1P11362 822 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 AXLP30530 894 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 SYKP43405 635 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 PRPF4BQ13523 1007 aaKnown RBP15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 CNNM4Q6P4Q7 775 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 NOTUMQ6P988 496 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 SFR1Q86XK3 245 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 KCNN1Q92952 543 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 FGFBP2Q9BYJ0 223 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 ZHX3Q9H4I2 956 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 PDZD7Q9H5P4 517 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 TMEM134Q9H6X4 195 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 ELAC1Q9H777 363 aaKnown RBP15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 TMEM161AQ9NX61 479 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 INSL6Q9Y581 213 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 PCDHB2Q9Y5E7 798 aa15.84■□□□□ 0.13
SRGAP3-208ENST00000490348 TRAK2O60296 914 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 GADD45BO75293 160 aaPredicted RBP15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 LINC00271P0C7V0 271 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 NMT1P30419 496 aaKnown RBP15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 CLLU1OSQ5K130 101 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 TMEM87AQ8NBN3 555 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 SMG8Q8ND04 991 aaKnown RBP15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 LPPQ93052 612 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 PAGE5Q96GU1 130 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 YME1L1Q96TA2 773 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 C7orf25Q9BPX7 421 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 MAGEF1Q9HAY2 307 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 MSRAQ9UJ68 235 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 PCDHB7Q9Y5E2 793 aa15.83■□□□□ 0.13
SRGAP3-208ENST00000490348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 LINC01553A4QN01 128 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 ZNF623O75123 536 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 AFMP43652 599 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 SMTNP53814 917 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 TAP1Q03518 808 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 SNW1Q13573 536 aaKnown RBP15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 CUL4BQ13620 913 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 EEF1DP3Q658K8 133 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 GPR153Q6NV75 609 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 Q7L0L9 218 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 HAUS6Q7Z4H7 955 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 FMR1NBQ8N0W7 255 aaPredicted RBP15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 RNF169Q8NCN4 708 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 ENGASEQ8NFI3 743 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 HPS3Q969F9 1004 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 CCDC51Q96ER9 411 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 PYM1Q9BRP8 204 aaKnown RBP15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 HES2Q9Y543 173 aa15.83■□□□□ 0.12
SRGAP3-208ENST00000490348 K7ENM7 598 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms