RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 FAM86C2PA6NEL3 165 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 LOC730098B7Z3J9 87 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 NT5C1B-RDH14C9J2C7 533 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 DGAT1O75907 488 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 OR52Z1P0C646 297 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■□□□ 14.2
SRSF4-204ENST00000489898 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 TPH2Q8IWU9 490 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 DAW1Q8N136 415 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 RNF169Q8NCN4 708 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 TCF25Q9BQ70 676 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 POLR3CQ9BUI4 534 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 CD207Q9UJ71 328 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-204ENST00000489898 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 PCDHB12Q9Y5F1 795 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
SRSF4-204ENST00000489898 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 PP2D1A8MPX8 630 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 NCK2O43639 380 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 DKC1O60832 514 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 LILRB3O75022 631 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 GALTP07902 379 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 COL9A1P20849 921 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 RPA1P27694 616 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 PPM1AP35813 382 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 DNM2P50570 870 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 RAB27AP51159 221 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 MAPK7Q13164 816 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 NAB2Q15742 525 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 IGSF21Q96ID5 467 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 CPB2Q96IY4 423 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 MRPL9Q9BYD2 267 aaKnown RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
SRSF4-204ENST00000489898 HES2Q9Y543 173 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 IPPQ9Y573 584 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 HCFC2Q9Y5Z7 792 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 IRAK3Q9Y616 596 aa13.16□□□□□ -0.3
SRSF4-204ENST00000489898 COL4A3Q01955 1670 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 MEFVO15553 781 aaPredicted RBP13.15□□□□□ -0.3
SRSF4-204ENST00000489898 GPR37L1O60883 481 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRSF4-204ENST00000489898 TRAPPC10P48553 1259 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 RABEP1Q15276 862 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 ZNF174Q15697 407 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
SRSF4-204ENST00000489898 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 ZSCAN31Q96LW9 406 aaPredicted RBP13.15□□□□□ -0.3
SRSF4-204ENST00000489898 ZFP42Q96MM3 310 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 RSAD1Q9HA92 442 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
SRSF4-204ENST00000489898 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 CFAP54Q96N23 3096 aa13.15□□□□□ -0.3
SRSF4-204ENST00000489898 CLASP2O75122 1294 aaKnown RBP13.14□□□□□ -0.31
SRSF4-204ENST00000489898 PAPLNO95428 1278 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 TECP42680 631 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 NDUFV1P49821 464 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 FAM187BQ17R55 369 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
SRSF4-204ENST00000489898 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 COLGALT2Q8IYK4 626 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
SRSF4-204ENST00000489898 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
SRSF4-204ENST00000489898 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms