RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 EXOC3O60645 756 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 SCP2P22307 547 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 PSMC2P35998 433 aaKnown RBP11.94□□□□□ -0.5
COL21A1-211ENST00000488912 GSDMDP57764 484 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 SNRPFP62306 86 aaKnown RBP11.94□□□□□ -0.5
COL21A1-211ENST00000488912 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 LRMPQ12912 555 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 STRN3Q13033 797 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 MYBPC2Q14324 1141 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 BORCS6Q96GS4 357 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 MKNK1Q9BUB5 465 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 FRMD4BQ9Y2L6 1034 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 A0A1W2PQC6 194 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 ADAMTS4O75173 837 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 HIC1Q14526 733 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 DCAF17Q5H9S7 520 aaPredicted RBP11.94□□□□□ -0.5
COL21A1-211ENST00000488912 FKBP15Q5T1M5 1219 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 LRRC8AQ8IWT6 810 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 CCDC155Q8N6L0 562 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 PPP1R16BQ96T49 567 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 CCDC113Q9H0I3 377 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 METTL14Q9HCE5 456 aaKnown RBP11.94□□□□□ -0.5
COL21A1-211ENST00000488912 XPNPEP3Q9NQH7 507 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 FRMPD3Q5JV73 1810 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
COL21A1-211ENST00000488912 RRN3P2A6NIE6 340 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 VTNP04004 478 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 GYPCP04921 128 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 TMOD1P28289 359 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 KLK7P49862 253 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 LIG4P49917 911 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 EFNA5P52803 228 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 TFDP1Q14186 410 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 SYCP1Q15431 976 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 TAF3Q5VWG9 929 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 XXYLT1Q8NBI6 393 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 KATNAL1Q9BW62 490 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 GOLGA8JA6NMD2 632 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 ASAP2O43150 1006 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 PIGRP01833 764 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 HSPA6P17066 643 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 SFPQP23246 707 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL21A1-211ENST00000488912 NKX3-2P78367 333 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 MAP2K1Q02750 393 aaPredicted RBP11.93□□□□□ -0.5
COL21A1-211ENST00000488912 RBL2Q08999 1139 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 TCERG1LQ5VWI1 586 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 CXCL17Q6UXB2 119 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 ZBTB8OSQ8IWT0 167 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 CCDC150Q8NCX0 1101 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 POMGNT1Q8WZA1 660 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 SLC35C1Q96A29 364 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 SAAL1Q96ER3 474 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 TARS2Q9BW92 718 aaKnown RBP11.93□□□□□ -0.5
COL21A1-211ENST00000488912 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
COL21A1-211ENST00000488912 MBLAC1A4D2B0 266 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 MSCO60682 206 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 INHAP05111 366 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 PTENP60484 403 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 ADAM17P78536 824 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 ARHGEF6Q15052 776 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 KIAA0319LQ8IZA0 1049 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 CPLX3Q8WVH0 158 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 BEGAINQ9BUH8 593 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 C2orf40Q9H1Z8 148 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 MINDY3Q9H8M7 445 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 IFT122Q9HBG6 1241 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 SIK3Q9Y2K2 1263 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 TRIM17Q9Y577 477 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 A0A087WZ62 844 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 INO80B-WBP1J3KQ70 363 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 KPNA6O60684 536 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 PRKCBP05771 671 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 ADRB2P07550 413 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 GARTP22102 1010 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 CASP14P31944 242 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 MBTD1Q05BQ5 628 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 BFSP1Q12934 665 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 MAPK6Q16659 721 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 PPFIBP1Q86W92 1011 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 CBWD2Q8IUF1 395 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 TC2NQ8N9U0 490 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 FDXACB1Q9BRP7 624 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 INO80BQ9C086 356 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 HAPLN2Q9GZV7 340 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms