RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SLC11A1P49279 550 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 NCBP1Q09161 790 aaKnown RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 ME3Q16798 604 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 IER5LQ5T953 404 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 SUGP1Q8IWZ8 645 aaKnown RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 FBXL6Q8N531 539 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 C12orf76Q8N812 135 aaPredicted RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 CNNM3Q8NE01 707 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 SLC22A17Q8WUG5 538 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 STK39Q9UEW8 545 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 FNDC1Q4ZHG4 1894 aaPredicted RBP17.08■□□□□ 0.33
TRIM50-203ENST00000488217 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 FAM205CA6NFA0 338 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
TRIM50-203ENST00000488217 PTENP60484 403 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 CYP4A11Q02928 519 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 EMC2Q15006 297 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRIM50-203ENST00000488217 KANK3Q6NY19 840 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 BCL7CQ8WUZ0 217 aaPredicted RBP17.08■□□□□ 0.32
TRIM50-203ENST00000488217 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 RIPOR3Q96MK2 946 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 PRRX2Q99811 253 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 EIF2AK1Q9BQI3 630 aaKnown RBP17.08■□□□□ 0.32
TRIM50-203ENST00000488217 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 RSAD1Q9HA92 442 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
TRIM50-203ENST00000488217 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
TRIM50-203ENST00000488217 LYPLA2O95372 231 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 POMCP01189 267 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 NEFLP07196 543 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 EPCAMP16422 314 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 SP100P23497 879 aaPredicted RBP17.07■□□□□ 0.32
TRIM50-203ENST00000488217 MRE11P49959 708 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 POU5F1BQ06416 359 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 RARS2Q5T160 578 aaKnown RBP17.07■□□□□ 0.32
TRIM50-203ENST00000488217 ZBTB33Q86T24 672 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
TRIM50-203ENST00000488217 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 MTRQ99707 1265 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 POMKQ9H5K3 350 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
TRIM50-203ENST00000488217 ANKEF1Q9NU02 776 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
TRIM50-203ENST00000488217 MYH9P35579 1960 aaKnown RBP17.07■□□□□ 0.32
TRIM50-203ENST00000488217 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 NRP1O14786 923 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 B4GALT3O60512 393 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 LILRB3O75022 631 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRIM50-203ENST00000488217 ITGA4P13612 1032 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 AXLP30530 894 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 ARL2P36404 184 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 TXKP42681 527 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 TFDP1Q14186 410 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 CALCRLQ16602 461 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 CABP7Q86V35 215 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 GTF3C6Q969F1 213 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 EMILIN2Q9BXX0 1053 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 XPNPEP1Q9NQW7 623 aa17.06■□□□□ 0.32
TRIM50-203ENST00000488217 C2CD4DB7Z1M9 353 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 DGAT1O75907 488 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 ERLIN2O94905 339 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 KLRC2P26717 231 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 AVPR2P30518 371 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 NEK4P51957 841 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 UBALD2Q8IYN6 164 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 MRPL17Q9NRX2 175 aaKnown RBP17.05■□□□□ 0.32
TRIM50-203ENST00000488217 PPP4R2Q9NY27 417 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 LIMD1Q9UGP4 676 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 DBR1Q9UK59 544 aaKnown RBP17.05■□□□□ 0.32
TRIM50-203ENST00000488217 IPPQ9Y573 584 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 PLXNA4Q9HCM2 1894 aa17.05■□□□□ 0.32
TRIM50-203ENST00000488217 MUC6Q6W4X9 2439 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 A0A087WWV3 80 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 ARL5CA6NH57 179 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 TSPAN1O60635 241 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 SSBP05455 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM50-203ENST00000488217 CNPP09543 421 aaKnown RBP17.04■□□□□ 0.32
TRIM50-203ENST00000488217 TRIM29Q14134 588 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms