RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TBK1Q9UHD2 729 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PPP1R9AQ9ULJ8 1098 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 NOVA2Q9UNW9 492 aaKnown RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 SART1O43290 800 aaKnown RBP14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PLA2G4AP47712 749 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 NAB2Q15742 525 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 TRAPPC11Q7Z392 1133 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PDCD2LQ9BRP1 358 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 NKIRAS1Q9NYS0 192 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 NOD1Q9Y239 953 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 PLAAQ9Y263 795 aa14.22□□□□□ -0.13
HMGN1-216ENST00000486741 LRRD1A4D1F6 860 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 EMBQ6PCB8 327 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 GPD1LQ8N335 351 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 SH2D3CQ8N5H7 860 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 SPATA33Q96N06 139 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 TOPORSQ9NS56 1045 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-216ENST00000486741 PASKQ96RG2 1323 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 SNHG28P0DPA3 235 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 TFDP1Q14186 410 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 ZNF568Q3ZCX4 644 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 LRRC55Q6ZSA7 311 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 ARMC9Q7Z3E5 817 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 SCYL3Q8IZE3 742 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 PSPC1Q8WXF1 523 aaKnown RBP14.21□□□□□ -0.13
HMGN1-216ENST00000486741 ANKRD36BP1Q96IX9 119 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
HMGN1-216ENST00000486741 SAMD15Q9P1V8 674 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 ATF2P15336 505 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 DNAJC24Q6P3W2 148 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 OSGEPQ9NPF4 335 aa14.21□□□□□ -0.13
HMGN1-216ENST00000486741 DGAT1O75907 488 aa14.21□□□□□ -0.14
HMGN1-216ENST00000486741 ACSL3O95573 720 aa14.21□□□□□ -0.14
HMGN1-216ENST00000486741 RWDD2BP57060 319 aa14.21□□□□□ -0.14
HMGN1-216ENST00000486741 CCNI2Q6ZMN8 369 aaPredicted RBP14.21□□□□□ -0.14
HMGN1-216ENST00000486741 CCDC63Q8NA47 563 aa14.21□□□□□ -0.14
HMGN1-216ENST00000486741 RNPC3Q96LT9 517 aaKnown RBP14.21□□□□□ -0.14
HMGN1-216ENST00000486741 FAM118BQ9BPY3 351 aa14.21□□□□□ -0.14
HMGN1-216ENST00000486741 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.144e-7■■■□□ 15.1
HMGN1-216ENST00000486741 TRIM51Q9BSJ1 452 aa14.21□□□□□ -0.14
HMGN1-216ENST00000486741 FEZ2Q9UHY8 353 aaPredicted RBP14.21□□□□□ -0.14
HMGN1-216ENST00000486741 LRP6O75581 1613 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 TTI1O43156 1089 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 PGK2P07205 417 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 ACTR2P61160 394 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 PPP2R5DQ14738 602 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 ANKS4BQ8N8V4 417 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 C1orf54Q8WWF1 131 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 EXOC4Q96A65 974 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 KLHL11Q9NVR0 708 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 FBXO40Q9UH90 709 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 ROBO3Q96MS0 1386 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 ECEL1O95672 775 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 VIL1P09327 827 aaKnown RBP14.2□□□□□ -0.14
HMGN1-216ENST00000486741 XKR3Q5GH77 459 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 FIGNQ5HY92 759 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 HP1BP3Q5SSJ5 553 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-216ENST00000486741 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 FAM83AQ86UY5 434 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 HDAC7Q8WUI4 952 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 RSAD2Q8WXG1 361 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 BTBD6Q96KE9 485 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 THAP2Q9H0W7 228 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 FAM114A2Q9NRY5 505 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 SIK3Q9Y2K2 1263 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 POC1B-GALNT4F8VUJ3 575 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 SPATA31C1P0DKV0 1188 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 CCNA1P78396 465 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 PPP2R5EQ16537 467 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 CDO1Q16878 200 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 ARSHQ5FYA8 562 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 SLC16A10Q8TF71 515 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 FAM84AQ96KN4 292 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 FUT8Q9BYC5 575 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 NSRP1Q9H0G5 558 aaKnown RBP14.2□□□□□ -0.14
HMGN1-216ENST00000486741 ZWILCHQ9H900 591 aa14.2□□□□□ -0.14
HMGN1-216ENST00000486741 EIF3DO15371 548 aaKnown RBP eCLIP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 RNF8O76064 485 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 DDNO94850 711 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 KRT1P04264 644 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 NEDD9Q14511 834 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 SLC35C1Q96A29 364 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 ANKZF1Q9H8Y5 726 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 ZSCAN5CA6NGD5 496 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 SGK1O00141 431 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 KRT14P02533 472 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 NPTX2P47972 431 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 RARRES1P49788 294 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 LIG3P49916 1009 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 KCNMA1Q12791 1236 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 OR2W6PQ8NHA6 318 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 RPF1Q9H9Y2 349 aaKnown RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 PIK3R2O00459 728 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 RAD51CO43502 376 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 P4HA1P13674 534 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms