RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 GPR152Q8TDT2 470 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ZNF384Q8TF68 577 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SCFD2Q8WU76 684 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PIGBQ92521 554 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CENPTQ96BT3 561 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TLCD1Q96CP7 247 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PBKQ96KB5 322 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 KRT12Q99456 494 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TSG101Q99816 390 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 MMTAG2Q9BU76 263 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SPZ1Q9BXG8 430 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 LRRC27Q9C0I9 530 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ZMYND12Q9H0C1 365 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SLITRK6Q9H5Y7 841 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CNOT10Q9H9A5 744 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 EPB41L5Q9HCM4 733 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 DCP1AQ9NPI6 582 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 C11orf16Q9NQ32 467 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PRDM11Q9NQV5 511 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM207AQ9NSI2 230 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ATP8A2Q9NTI2 1148 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 BLOC1S4Q9NUP1 217 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SMARCAL1Q9NZC9 954 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 EHD2Q9NZN4 543 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ASAP1Q9ULH1 1129 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PLAAQ9Y263 795 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ZBTB1Q9Y2K1 713 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ATP6V0A2Q9Y487 856 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 KCNMB2Q9Y691 235 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 MYH1P12882 1939 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CYP2D7A0A087X1C5 515 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 A0A0A6YYK5 440 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 ESYT3A0FGR9 886 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CARNS1A5YM72 827 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 ZSCAN5CA6NGD5 496 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 J3QW42 95 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 PGRMC1O00264 195 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CLGNO14967 610 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NKRFO15226 690 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MGRN1O60291 552 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MMP20O60882 483 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NOL4O94818 638 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 KIF4AO95239 1232 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 EGFRP00533 1210 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GHRHP01286 108 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 FURINP09958 794 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NUDT17P0C025 328 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 VEGFAP15692 232 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GCFC2P16383 781 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 ERCC3P19447 782 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 DRD4P21917 467 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 SMARCA1P28370 1054 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CXCR5P32302 372 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NF2P35240 595 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 USP11P51784 963 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GUCY2FP51841 1108 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CDR1P51861 262 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NRLP54845 237 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 EIF3BP55884 814 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC8A3P57103 927 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 RAC1P63000 192 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 PPP2R2AP63151 447 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 DYNLL1P63167 89 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 PLAURQ03405 335 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GRB10Q13322 594 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 RIPK1Q13546 671 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 ITIH4Q14624 930 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CRYMQ14894 314 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NONOQ15233 471 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 IFI16Q16666 785 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 INF2Q27J81 1249 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 PERM1Q5SV97 790 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 RNF187Q5TA31 235 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CRELD2Q6UXH1 353 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CACNA2D4Q7Z3S7 1137 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MAATS1Q7Z4T9 603 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 TRIM59Q8IWR1 403 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CACNA2D3Q8IZS8 1091 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 RASGEF1CQ8N431 466 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GPATCH11Q8N954 259 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 LRRC57Q8N9N7 239 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GIMAP7Q8NHV1 300 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 RASGRP4Q8TDF6 673 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 TAF4BQ92750 862 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 NSUN4Q96CB9 384 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CALML4Q96GE6 196 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MS4A14Q96JA4 679 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC114Q96M63 670 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MTMR9Q96QG7 549 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 LPIN3Q9BQK8 851 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 JPH2Q9BR39 696 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 TXLNGYQ9BZA5 131 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 OSBPL7Q9BZF2 842 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CRNKL1Q9BZJ0 848 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM129AQ9BZQ8 928 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 SMG9Q9H0W8 520 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 GANQ9H2C0 597 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 RABEP2Q9H5N1 569 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC134Q9H6E4 229 aa5.11□□□□□ -1.59
SMARCC1-206ENST00000485737 MMRN2Q9H8L6 949 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms