RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DEPTORQ8TB45 409 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 RAD54LQ92698 747 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 SYMPKQ92797 1274 aaKnown RBP19.89■□□□□ 0.77
HDAC6-225ENST00000483506 CLIC6Q96NY7 704 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 CWH43Q9H720 699 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 MYH11P35749 1972 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 SPTLC2O15270 562 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 B4GALT5O43286 388 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 NCLP19338 710 aaKnown RBP19.88■□□□□ 0.77
HDAC6-225ENST00000483506 GPM6BQ13491 265 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 BECN1Q14457 450 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 STK38Q15208 465 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 MAPK6Q16659 721 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 ARSHQ5FYA8 562 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 LRRC55Q6ZSA7 311 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 ABI1Q8IZP0 508 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 RNF169Q8NCN4 708 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 SMG8Q8ND04 991 aaKnown RBP19.88■□□□□ 0.77
HDAC6-225ENST00000483506 PGBD4Q96DM1 585 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 CPB2Q96IY4 423 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 MRPL9Q9BYD2 267 aaKnown RBP19.88■□□□□ 0.77
HDAC6-225ENST00000483506 LMAN2LQ9H0V9 348 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 POLD4Q9HCU8 107 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 TYW1Q9NV66 732 aaKnown RBP19.88■□□□□ 0.77
HDAC6-225ENST00000483506 ARHGAP28Q9P2N2 729 aa19.88■□□□□ 0.77
HDAC6-225ENST00000483506 PHLPP2Q6ZVD8 1323 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 ATG2AQ2TAZ0 1938 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 MEIS3P2A8K0S8 358 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 ACKR2O00590 384 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 NPTX2P47972 431 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 DMP1Q13316 513 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 CSPP1Q1MSJ5 1256 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 SPECC1Q5M775 1068 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 FOXD4L5Q5VV16 416 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 AGMOQ6ZNB7 445 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 HELQQ8TDG4 1101 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 SPIRE2Q8WWL2 714 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 FOXD4L4Q8WXT5 416 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 LARP4BQ92615 738 aaKnown RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 KCNN1Q92952 543 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 LPPQ93052 612 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 MRPL38Q96DV4 380 aaKnown RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 NTPCRQ9BSD7 190 aaKnown RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 KIFC3Q9BVG8 833 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 EIF2AQ9BY44 585 aaKnown RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 AAASQ9NRG9 546 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 TFIP11Q9UBB9 837 aaKnown RBP19.87■□□□□ 0.77
HDAC6-225ENST00000483506 STK17AQ9UEE5 414 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 CCDC39Q9UFE4 941 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 KCNG1Q9UIX4 513 aa19.87■□□□□ 0.77
HDAC6-225ENST00000483506 ZMYM2Q9UBW7 1377 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 INPPL1O15357 1258 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 OFD1O75665 1012 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 SSBP05455 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
HDAC6-225ENST00000483506 PRKCBP05771 671 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 LAG3P18627 525 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 DDIT3P35638 169 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 TXLNAP40222 546 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 PEX3P56589 373 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 PTPROQ16827 1216 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 SLC27A1Q6PCB7 646 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 GLB1LQ6UWU2 654 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 RASSF8Q8NHQ8 419 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 TMEM134Q9H6X4 195 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 HCSTQ9UBK5 93 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 ODF2LQ9ULJ1 636 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 PLAGL2Q9UPG8 496 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 ZDHHC9Q9Y397 364 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 IPPQ9Y573 584 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
HDAC6-225ENST00000483506 SPTBN5Q9NRC6 3674 aaKnown RBP19.86■□□□□ 0.77
HDAC6-225ENST00000483506 EDN1P05305 212 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 PLS3P13797 630 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 ZNF131P52739 623 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 PRPF4BQ13523 1007 aaKnown RBP19.85■□□□□ 0.77
HDAC6-225ENST00000483506 MCM6Q14566 821 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 GPBP1Q86WP2 473 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 COLGALT1Q8NBJ5 622 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 KCNG4Q8TDN1 519 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 PDZD7Q9H5P4 517 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 RSAD1Q9HA92 442 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 UBN1Q9NPG3 1134 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
HDAC6-225ENST00000483506 PCDHB12Q9Y5F1 795 aa19.85■□□□□ 0.77
HDAC6-225ENST00000483506 PLXNA4Q9HCM2 1894 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 TTLL13PA6NNM8 815 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 N4BP3O15049 544 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 GRM6O15303 877 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 ITGB1P05556 798 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 NOMO2Q5JPE7 1267 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 TAS1R3Q7RTX0 852 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 KLHL23Q8NBE8 558 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 REEP2Q9BRK0 252 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 KMT5AQ9NQR1 393 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 CFAP45Q9UL16 551 aa19.84■□□□□ 0.77
HDAC6-225ENST00000483506 NPHP3-ACAD11A0A0J9YXS1 232 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 CARNS1A5YM72 827 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 CCDC169A6NNP5 214 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 SFI1A8K8P3 1242 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 K7ERI5 159 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms