RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 NRDE2Q9H7Z3 1164 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
CPSF4-212ENST00000482251 PUF60Q9UHX1 559 aaKnown RBP11.64□□□□□ -0.55
CPSF4-212ENST00000482251 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
CPSF4-212ENST00000482251 HES2Q9Y543 173 aa11.64□□□□□ -0.55
CPSF4-212ENST00000482251 ASAP2O43150 1006 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 OFD1O75665 1012 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 POMCP01189 267 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 ARL2P36404 184 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 MLH1P40692 756 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 SLC11A1P49279 550 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 PTENP60484 403 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
CPSF4-212ENST00000482251 SMAD2Q15796 467 aaKnown RBP11.63□□□□□ -0.55
CPSF4-212ENST00000482251 MCTP1Q6DN14 999 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 ZNF280BQ86YH2 543 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 ADHFE1Q8IWW8 467 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 SMRP1Q8NCR6 262 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 ERMNQ8TAM6 284 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 URGCPQ8TCY9 931 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 PGBD4Q96DM1 585 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 TMEM169Q96HH4 297 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 NXF3Q9H4D5 531 aaKnown RBP11.63□□□□□ -0.55
CPSF4-212ENST00000482251 TUFT1Q9NNX1 390 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 CDH22Q9UJ99 828 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 LZTS1Q9Y250 596 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 USP15Q9Y4E8 981 aaPredicted RBP11.63□□□□□ -0.55
CPSF4-212ENST00000482251 IPPQ9Y573 584 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
CPSF4-212ENST00000482251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 ARHGEF35A5YM69 484 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 PP2D1A8MPX8 630 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 ZNF623O75123 536 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 SSBP05455 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 ARF4P18085 180 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 LIG1P18858 919 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 SP100P23497 879 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 SMC1AQ14683 1233 aaKnown RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 ECM1Q16610 540 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 AMHR2Q16671 573 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 HAUS3Q68CZ6 603 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 NOTUMQ6P988 496 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 VPS52Q8N1B4 723 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 BSNDQ8WZ55 320 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 TMX3Q96JJ7 454 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 KIFC3Q9BVG8 833 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 C1QTNF1Q9BXJ1 281 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 TRIM6Q9C030 488 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 POLD4Q9HCU8 107 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
CPSF4-212ENST00000482251 PRG3Q9Y2Y8 225 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-212ENST00000482251 C2orf71A6NGG8 1288 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 DDHD2O94830 711 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 NPTXRO95502 500 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 GALTP07902 379 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 ITGA4P13612 1032 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 NCLP19338 710 aaKnown RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 RPA1P27694 616 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 GJB2P29033 226 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 SCNN1GP51170 649 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 COASYQ13057 564 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 PTGDRQ13258 359 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 ORC2Q13416 577 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 TMEM132AQ24JP5 1023 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 PDE12Q6L8Q7 609 aaKnown RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 MCPH1Q8NEM0 835 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 SNX29Q8TEQ0 813 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 IGSF21Q96ID5 467 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 FAM193BQ96PV7 902 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 NACC1Q96RE7 527 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 GAD1Q99259 594 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 CDCA3Q99618 268 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 POLR3CQ9BUI4 534 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 VN1R3Q9BXE9 311 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 ZBP1Q9H171 429 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 NGRNQ9NPE2 291 aaKnown RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 PRKAG3Q9UGI9 489 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 DBR1Q9UK59 544 aaKnown RBP11.61□□□□□ -0.55
CPSF4-212ENST00000482251 USP20Q9Y2K6 914 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 HCFC2Q9Y5Z7 792 aa11.61□□□□□ -0.55
CPSF4-212ENST00000482251 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 ARL5CA6NH57 179 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 F8W810 466 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 EYA4O95677 639 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 SRGAP2BP0DMP2 458 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 AKAP5P24588 427 aa11.6□□□□□ -0.55
CPSF4-212ENST00000482251 CDC25AP30304 524 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms