RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CYP2C19P33261 490 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 MEOX1P50221 254 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 SESN2P58004 480 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-210ENST00000482158 MEF2AQ02078 507 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-210ENST00000482158 UBE3CQ15386 1083 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 CIAPIN1Q6FI81 312 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 B3GNT9Q6UX72 402 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 TAS1R1Q7RTX1 841 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 DPF2Q92785 391 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 AIFM3Q96NN9 605 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 CSRNP2Q9H175 543 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 SLC12A5Q9H2X9 1139 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 MROH6A6NGR9 719 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 GSPT1P15170 499 aaKnown RBP7.49□□□□□ -1.21
SF3B1-210ENST00000482158 VCAM1P19320 739 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 ADAM8P78325 824 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 HGFACQ04756 655 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 MGAT2Q10469 447 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 SEPT2Q15019 361 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 ACAP1Q15027 740 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 C3orf36Q3SXR2 165 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 CATIPQ7Z7H3 387 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 MIER2Q8N344 545 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 PRR18Q8N4B5 295 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 PLA2G15Q8NCC3 412 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.49□□□□□ -1.21
SF3B1-210ENST00000482158 GPR156Q8NFN8 814 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 SNX33Q8WV41 574 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 GTPBP4Q9BZE4 634 aaKnown RBP7.49□□□□□ -1.21
SF3B1-210ENST00000482158 OR10A2Q9H208 303 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 RBM12Q9NTZ6 932 aaKnown RBP7.49□□□□□ -1.21
SF3B1-210ENST00000482158 DNM3Q9UQ16 869 aa7.49□□□□□ -1.21
SF3B1-210ENST00000482158 CCDC154A6NI56 674 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 B4GALT3O60512 393 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 GTF2H3Q13889 308 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 UAP1L1Q3KQV9 507 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 HSP90AB2PQ58FF8 381 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 Q6ZVL8 140 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 USP30Q70CQ3 517 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 KBTBD2Q8IY47 623 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 LILRA3Q8N6C8 439 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-210ENST00000482158 PAWRQ96IZ0 340 aaKnown RBP7.48□□□□□ -1.21
SF3B1-210ENST00000482158 UIMC1Q96RL1 719 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 ADI1Q9BV57 179 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 INTUQ9ULD6 942 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 FAM184BQ9ULE4 1060 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 RBM8AQ9Y5S9 174 aaKnown RBP7.48□□□□□ -1.21
SF3B1-210ENST00000482158 RPTORQ8N122 1335 aa7.48□□□□□ -1.21
SF3B1-210ENST00000482158 DAPK3O43293 454 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 PDCP20941 246 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 KIR2DL3P43628 341 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 ADCY7P51828 1080 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 SLC16A1P53985 500 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 ATP2C1P98194 919 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-210ENST00000482158 NFYCQ13952 458 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 ZNF267Q14586 743 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-210ENST00000482158 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 ZMAT1Q5H9K5 638 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 LILRA6Q6PI73 481 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 RALYLQ86SE5 291 aaKnown RBP7.47□□□□□ -1.21
SF3B1-210ENST00000482158 LRRC56Q8IYG6 542 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-210ENST00000482158 ZDHHC14Q8IZN3 488 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 CFHR4Q92496 578 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 ING3Q9NXR8 418 aa7.47□□□□□ -1.21
SF3B1-210ENST00000482158 MATN2O00339 956 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 AKR1B10O60218 316 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 PRAMEF4O60810 478 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 TRIM13O60858 407 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 ALDH1A2O94788 518 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 SLC6A9P48067 706 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 KCNC1P48547 511 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 NOMO1Q15155 1222 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 MST1LQ2TV78 715 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 ATAT1Q5SQI0 421 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 CCDC181Q5TID7 509 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 USP45Q70EL2 814 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 SYT8Q8NBV8 401 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 OR14K1Q8NGZ2 314 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 HPS3Q969F9 1004 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 RUNDC1Q96C34 613 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 SLC7A6OSQ96CW6 309 aaPredicted RBP7.46□□□□□ -1.22
SF3B1-210ENST00000482158 CLIP3Q96DZ5 547 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 LRGUKQ96M69 825 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 TLR9Q9NR96 1032 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 SIK3Q9Y2K2 1263 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 SLC4A7Q9Y6M7 1214 aa7.46□□□□□ -1.22
SF3B1-210ENST00000482158 ARHGAP6O43182 974 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 AP1G1O43747 822 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 TOX4O94842 621 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 CNOT4O95628 575 aaKnown RBP7.45□□□□□ -1.22
SF3B1-210ENST00000482158 ATF3P18847 181 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 ADSLP30566 484 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-210ENST00000482158 TXKP42681 527 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 IL10RAQ13651 578 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 IFIT1BQ5T764 474 aaKnown RBP7.45□□□□□ -1.22
SF3B1-210ENST00000482158 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3B1-210ENST00000482158 SLC35G2Q8TBE7 412 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 GCDHQ92947 438 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms