RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
PKP4-211ENST00000481115 QPCTLQ9NXS2 382 aa7.73□□□□□ -1.17
PKP4-211ENST00000481115 DDX43Q9NXZ2 648 aaKnown RBP7.73□□□□□ -1.17
PKP4-211ENST00000481115 AATFQ9NY61 560 aaKnown RBP eCLIP7.73□□□□□ -1.17
PKP4-211ENST00000481115 CYP39A1Q9NYL5 469 aa7.73□□□□□ -1.17
PKP4-211ENST00000481115 ADAM22Q9P0K1 906 aa7.73□□□□□ -1.17
PKP4-211ENST00000481115 FNDC3AQ9Y2H6 1198 aaKnown RBP7.73□□□□□ -1.17
PKP4-211ENST00000481115 TBC1D30Q9Y2I9 924 aa7.73□□□□□ -1.17
PKP4-211ENST00000481115 CCDC188H7C350 402 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 PDE2AO00408 941 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 IPO5O00410 1097 aaKnown RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 TRAFD1O14545 582 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 ZBED4O75132 1171 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 GJB6O95452 261 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 SNRPA1P09661 255 aaKnown RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 RARAP10276 462 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 BMP6P22004 513 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 FSHRP23945 695 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 VHLP40337 213 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 MMP13P45452 471 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 DNM2P50570 870 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 FXR1P51114 621 aaKnown RBP eCLIP7.72□□□□□ -1.17
PKP4-211ENST00000481115 ALDH5A1P51649 535 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 NEK2P51955 445 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 STK3Q13188 491 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 PNOCQ13519 176 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 ITPK1Q13572 414 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 KRT72Q14CN4 511 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 CCDC85BQ15834 202 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 TTC39AQ5SRH9 613 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 PCNX4Q63HM2 1172 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 RNF43Q68DV7 783 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 PDE12Q6L8Q7 609 aaKnown RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 TBC1D1Q86TI0 1168 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 RAB11FIP4Q86YS3 637 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 CROCCP3Q8IVE0 287 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 FOXP4Q8IVH2 680 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 NME8Q8N427 588 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 SH2D3CQ8N5H7 860 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 ATP11CQ8NB49 1132 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 LINS1Q8NG48 757 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 PIGOQ8TEQ8 1089 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 DNAJC9Q8WXX5 260 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 GATA6Q92908 595 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 HIC2Q96JB3 615 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 C8orf48Q96LL4 319 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 CDK15Q96Q40 435 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 SPOCK3Q9BQ16 436 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 SYT15Q9BQS2 421 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 CORO1BQ9BR76 489 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 TUBB6Q9BUF5 446 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 UBE2OQ9C0C9 1292 aaKnown RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 SUV39H2Q9H5I1 410 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 IL1RAPL2Q9NP60 686 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 JADE2Q9NQC1 790 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 AIPL1Q9NZN9 384 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 CNTN3Q9P232 1028 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 HDAC6Q9UBN7 1215 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 DNAJB4Q9UDY4 337 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 RWDD2AQ9UIY3 292 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 CCNL1Q9UK58 526 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
PKP4-211ENST00000481115 REXO2Q9Y3B8 237 aaKnown RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 USP15Q9Y4E8 981 aaPredicted RBP7.72□□□□□ -1.17
PKP4-211ENST00000481115 MYH10P35580 1976 aa7.71□□□□□ -1.17
PKP4-211ENST00000481115 PRAMEF22A3QJZ6 481 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 CCDC169A6NNP5 214 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 SMAD7O15105 426 aaKnown RBP7.71□□□□□ -1.18
PKP4-211ENST00000481115 TEX33O43247 280 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 SNX3O60493 162 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 PFDN1O60925 122 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 MBD4O95243 580 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 AGTP01019 485 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 NUDT17P0C025 328 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 TPBGLP0DKB5 382 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 FDPSP14324 419 aaKnown RBP7.71□□□□□ -1.18
PKP4-211ENST00000481115 CYP11B2P19099 503 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 HMGB2P26583 209 aaKnown RBP7.71□□□□□ -1.18
PKP4-211ENST00000481115 TMOD1P28289 359 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 POLD1P28340 1107 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 IARSP41252 1262 aaKnown RBP7.71□□□□□ -1.18
PKP4-211ENST00000481115 GRM5P41594 1212 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 TRPC1P48995 793 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 OXCT1P55809 520 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 POLE2P56282 527 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 HERVK_113P62684 666 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 PDE4BQ07343 736 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 GOLGA8FQ08AF8 430 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 GOLGA8DPQ0D2H9 430 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 CBX3Q13185 183 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 BTG3Q14201 252 aaPredicted RBP7.71□□□□□ -1.18
PKP4-211ENST00000481115 PLS1Q14651 629 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 TTF1Q15361 905 aaPredicted RBP7.71□□□□□ -1.18
PKP4-211ENST00000481115 SPA17Q15506 151 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 INAQ16352 499 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 HIF1AQ16665 826 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 LONRF3Q496Y0 759 aa7.71□□□□□ -1.18
PKP4-211ENST00000481115 MCMDC2Q4G0Z9 681 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms