RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZBTB46Q86UZ6 589 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 GLB1L3Q8NCI6 653 aaPredicted RBP5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 GIMAP8Q8ND71 665 aaPredicted RBP5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 CFHR4Q92496 578 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 RABGGTAQ92696 567 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 RPL10LQ96L21 214 aaKnown RBP5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 PTPN18Q99952 460 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 DPYSL5Q9BPU6 564 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 SLC13A1Q9BZW2 595 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 MEGF9Q9H1U4 602 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 PPP4R1LQ9P1A2 415 aa5.26□□□□□ -1.57
SMARCA1-204ENST00000478420 MATN2O00339 956 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 MTSS1O43312 755 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 LTA4HP09960 611 aaKnown RBP5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 NEK2P51955 445 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 CTSWP56202 376 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 MALLQ13021 153 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 MUM1L1Q5H9M0 696 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 FAM180AQ6UWF9 173 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 TAX1BP1Q86VP1 789 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 SHCBP1Q8NEM2 672 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 CHMP4CQ96CF2 233 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 GNRHR2Q96P88 292 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 SLC2A13Q96QE2 648 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 GREM2Q9H772 168 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 ING3Q9NXR8 418 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 RCAN3Q9UKA8 241 aa5.25□□□□□ -1.57
SMARCA1-204ENST00000478420 A0A1W2PRX2 142 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 FZD9O00144 591 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 NRP1O14786 923 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA12O60330 932 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PHF2O75151 1096 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 TMEM127O75204 238 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 SNUPNO95149 360 aaKnown RBP5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 CTSSP25774 331 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 WNT3AP56704 352 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 RIN1Q13671 783 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 UBE3CQ15386 1083 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PLEKHG6Q3KR16 790 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 GJC2Q5T442 439 aaPredicted RBP5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 EFCAB2Q5VUJ9 269 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 LIMS2Q7Z4I7 341 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 CIR1Q86X95 450 aaPredicted RBP5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 SNX33Q8WV41 574 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 JADE3Q92613 823 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 C20orf173Q96LM9 149 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PUS7Q96PZ0 661 aaKnown RBP5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 BDH2Q9BUT1 245 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 ADI1Q9BV57 179 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 NELFAQ9H3P2 528 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 NCDNQ9UBB6 729 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA9Q9Y5G4 932 aaKnown RBP5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA8Q9Y5G5 932 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA7Q9Y5G6 932 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA6Q9Y5G7 932 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA3Q9Y5H0 932 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 PCDHGA2Q9Y5H1 932 aa5.24□□□□□ -1.57
SMARCA1-204ENST00000478420 RPTORQ8N122 1335 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 AKR1B10O60218 316 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 S100BP04271 92 aaPredicted RBP5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 ITGB3P05106 788 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 TTF1Q15361 905 aaPredicted RBP5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 ODR4Q5SWX8 454 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 ABHD15Q6UXT9 468 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 CMTM4Q8IZR5 234 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 MSL3Q8N5Y2 521 aaKnown RBP5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 PPM1NQ8N819 430 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 GPR156Q8NFN8 814 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 RIN2Q8WYP3 895 aaPredicted RBP5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 TEKT5Q96M29 485 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 GPHA2Q96T91 129 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 PLA2G12BQ9BX93 195 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 KRTAP4-5Q9BYR2 181 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 IL23AQ9NPF7 189 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 TLR9Q9NR96 1032 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 AASDHPPTQ9NRN7 309 aa5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 RBM12Q9NTZ6 932 aaKnown RBP5.23□□□□□ -1.57
SMARCA1-204ENST00000478420 UBE2QL1A1L167 161 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 GPR42O15529 346 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 NDUFS2O75306 463 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 GSPT1P15170 499 aaKnown RBP5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 GYPEP15421 78 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 MCAMP43121 646 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 SLC16A1P53985 500 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 NPEPPSP55786 919 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 ADAM8P78325 824 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 PLP2Q04941 152 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 DUSP2Q05923 314 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 SAFB2Q14151 953 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 TCTN3Q6NUS6 607 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 GPR135Q8IZ08 494 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 RELTQ969Z4 430 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 OR14A2Q96R54 314 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms