RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 MILR1Q7Z6M3 343 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 MTDHQ86UE4 582 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 DDX42Q86XP3 938 aaKnown RBP eCLIP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 THEMISQ8N1K5 641 aaPredicted RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 NKAPQ8N5F7 415 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 UHMK1Q8TAS1 419 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 MZB1Q8WU39 189 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 RTF1Q92541 710 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 ZNF75CPQ92670 426 aaPredicted RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 C1orf74Q96LT6 269 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 PPM1MQ96MI6 270 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 TACO1Q9BSH4 297 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 SARGQ9BW04 601 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 SGPP1Q9BX95 441 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 AP1M1Q9BXS5 423 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 MAK16Q9BXY0 300 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 MRPL4Q9BYD3 311 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 FAM126AQ9BYI3 521 aaPredicted RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 TRIM8Q9BZR9 551 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 CNTD2Q9H8S5 307 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 RXFP1Q9HBX9 757 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 SAGE1Q9NXZ1 904 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 NDOR1Q9UHB4 597 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 CTNNA3Q9UI47 895 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 HERC5Q9UII4 1024 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 ZNF112Q9UJU3 913 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 NOSIPQ9Y314 301 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 DAAM1Q9Y4D1 1078 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 N6AMT1Q9Y5N5 214 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 HCFC2Q9Y5Z7 792 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 DDX49Q9Y6V7 483 aaKnown RBP3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 BIVM-ERCC5R4GMW8 1640 aa3.99□□□□□ -1.77
FNDC3B-209ENST00000478016 GAPVD1Q14C86 1478 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CEP170Q5SW79 1584 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ERCC6L2Q5T890 1561 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 A0A0B4J203 849 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 A0A1B0GVC2 190 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 TCAF2A6NFQ2 919 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 FAM47E-STBD1D6RA91 191 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 F8VZ95 297 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 TULP2O00295 520 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 KRIT1O00522 736 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 HGSO14964 777 aaPredicted RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 N4BP3O15049 544 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 MAFKO60675 156 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 APBB3O95704 486 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SOD2P04179 222 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 C8AP07357 584 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 PHKG2P15735 406 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ZSCAN20P17040 1043 aaPredicted RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CD9P21926 228 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RPS6KB1P23443 525 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SERPINB3P29508 390 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RAD52P43351 418 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RAP1GAPP47736 663 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CTCFP49711 727 aaPredicted RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CDR1P51861 262 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 NEK2P51955 445 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CTAG1AP78358 180 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 GUCY1A3Q02108 690 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 STK3Q13188 491 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SLMAPQ14BN4 828 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 TNIP1Q15025 636 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 EMC4Q5J8M3 183 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CCDC122Q5T0U0 273 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 INTS11Q5TA45 600 aaKnown RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 STEAP3Q658P3 488 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ISM2Q6H9L7 571 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 CYB5RLQ6IPT4 315 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 FIP1L1Q6UN15 594 aaKnown RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ATG14Q6ZNE5 492 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 GALNT5Q7Z7M9 940 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 LDHDQ86WU2 507 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RNF168Q8IYW5 571 aaPredicted RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RTKN2Q8IZC4 609 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SYNPOQ8N3V7 929 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 MAGEB6Q8N7X4 407 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 LSMEM1Q8N8F7 131 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 GSTCDQ8NEC7 633 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 PJA1Q8NG27 643 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ALG3Q92685 438 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 HVCN1Q96D96 273 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 TSGA13Q96PP4 275 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 TCHPQ9BT92 498 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 JAM3Q9BX67 310 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SLC13A1Q9BZW2 595 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RNF38Q9H0F5 515 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SLC52A2Q9HAB3 445 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 NCOA5Q9HCD5 579 aaKnown RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 KIAA1586Q9HCI6 787 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 GCM1Q9NP62 436 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 EXOC1Q9NV70 894 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ZIM2Q9NZV7 527 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 PALD1Q9ULE6 856 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 SIT1Q9Y3P8 196 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 ABCA10Q8WWZ4 1543 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 BRD4O60885 1362 aaPredicted RBP3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 GRIN2AQ12879 1464 aa3.98□□□□□ -1.77
FNDC3B-209ENST00000478016 RUSC2Q8N2Y8 1516 aa3.97□□□□□ -1.77
FNDC3B-209ENST00000478016 TOP2BQ02880 1626 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms