RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 USP17L24Q0WX57 530 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 FAM83BQ5T0W9 1011 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 TTI2Q6NXR4 508 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 USP17L6PQ6QN14 398 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 CENPUQ71F23 418 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 KIAA0825Q8IV33 1275 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 ARHGEF1Q92888 912 aaKnown RBP6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 FAM81BQ96LP2 452 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 SH3GL1Q99961 368 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 GINS4Q9BRT9 223 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 ETNK1Q9HBU6 452 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 UBAP1Q9NZ09 502 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 SNX12Q9UMY4 172 aa6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 PDS5AQ29RF7 1337 aaKnown RBP6.51□□□□□ -1.37
HNRNPU-208ENST00000475997 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PODXLO00592 558 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CLIC2O15247 247 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 NVLO15381 856 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TOM1O60784 492 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 HLA-DPA1P20036 260 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 SERPINB3P29508 390 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PRPSAP1Q14558 356 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 NFIXQ14938 502 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 INAQ16352 499 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 SLFN13Q68D06 897 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TMED8Q6PL24 325 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CCNI2Q6ZMN8 369 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 RAPH1Q70E73 1250 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TMC4Q7Z404 712 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 KBTBD4Q9NVX7 518 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PKD2L2Q9NZM6 624 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 MAD2L2Q9UI95 211 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CDV3Q9UKY7 258 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 ZMYND8Q9ULU4 1186 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 BCL9O00512 1426 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 LRRIQ3A6PVS8 624 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PRR23D1E9PI22 279 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 HNRNPRO43390 633 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PALMO75781 387 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CPP00450 1065 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PRR23D2P0DMB1 279 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 OCRLQ01968 901 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 STX3Q13277 289 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 ZYXQ15942 572 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 GPATCH4Q5T3I0 446 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 LINC00116Q8NCU8 138 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 MAML1Q92585 1016 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 ZBTB18Q99592 522 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 C7orf25Q9BPX7 421 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PDP2Q9P2J9 529 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 SLC13A4Q9UKG4 626 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TTLL3Q9Y4R7 772 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TMEM191CA6NGB0 347 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 H0YCG3 227 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TOM1L1O75674 476 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 KRT14P02533 472 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 SERPING1P05155 500 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TMEM191BP0C7N4 346 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CCND1P24385 295 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CYP2J2P51589 502 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 FUT2Q10981 343 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CYP4F22Q6NT55 531 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 BZW1Q7L1Q6 419 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PCGF5Q86SE9 256 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 RAD54LQ92698 747 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 ATP6V1E2Q96A05 226 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CCDC90BQ9GZT6 254 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 RAD21L1Q9H4I0 556 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 IL17RBQ9NRM6 502 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 C1orf112Q9NSG2 853 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 DIS3Q9Y2L1 958 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PNMA6FA0A0J9YX94 578 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 UBAP1LF5GYI3 381 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 CCDC22O60826 627 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PDE5AO76074 875 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 ST13P50502 369 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 HERVK_113P62684 666 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 SGO2Q562F6 1265 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TRAPPC11Q7Z392 1133 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 RASSF3Q86WH2 238 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 PDIK1LQ8N165 341 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 MCUQ8NE86 351 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 RFWD2Q8NHY2 731 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 MS4A14Q96JA4 679 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 BTBD6Q96KE9 485 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 TTC25Q96NG3 672 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 DNAJC7Q99615 494 aa6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 THRAP3Q9Y2W1 955 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-208ENST00000475997 H7C0C1 242 aa6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 TMCC1O94876 653 aa6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 ATP5OP48047 213 aa6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 SNAP25P60880 206 aa6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 MORF4L2Q15014 288 aa6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 IL17AQ16552 155 aa6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 CERKLQ49MI3 558 aaPredicted RBP6.49□□□□□ -1.37
HNRNPU-208ENST00000475997 ZBTB41Q5SVQ8 909 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms