RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TMX3Q96JJ7 454 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 MINDY3Q9H8M7 445 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 AGPAT5Q9NUQ2 364 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 FAM105AQ9NUU6 356 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 RNF19AQ9NV58 838 aa10.49□□□□□ -0.73
PDPN-204ENST00000475043 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 MED24O75448 989 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 CD2BP2O95400 341 aaKnown RBP10.48□□□□□ -0.73
PDPN-204ENST00000475043 SPATA31C1P0DKV0 1188 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 ATF7P17544 494 aaPredicted RBP10.48□□□□□ -0.73
PDPN-204ENST00000475043 TRAPPC10P48553 1259 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 RAB27AP51159 221 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 UBE3AQ05086 875 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 CAMK2BQ13554 666 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 CLUL1Q15846 466 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 KCNT2Q6UVM3 1135 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 GLB1LQ6UWU2 654 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 ADGRD2Q7Z7M1 963 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 ZNF598Q86UK7 904 aaKnown RBP10.48□□□□□ -0.73
PDPN-204ENST00000475043 CATSPER3Q86XQ3 398 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 ZNF558Q96NG5 402 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
PDPN-204ENST00000475043 ADAM33Q9BZ11 813 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 TUFT1Q9NNX1 390 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 XPNPEP1Q9NQW7 623 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 TLR9Q9NR96 1032 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 PUF60Q9UHX1 559 aaKnown RBP10.48□□□□□ -0.73
PDPN-204ENST00000475043 INPP5FQ9Y2H2 1132 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 PCDHGC5Q9Y5F6 944 aa10.48□□□□□ -0.73
PDPN-204ENST00000475043 MEIS3P2A8K0S8 358 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 H3BQV1 296 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 LINC01565O15544 149 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 XRCC6P12956 609 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDPN-204ENST00000475043 IL9P15248 144 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 U2AF2P26368 475 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDPN-204ENST00000475043 RPA1P27694 616 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 GJB2P29033 226 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 CA8P35219 290 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 PPM1AP35813 382 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 LTBRP36941 435 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 NRIP1P48552 1158 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 ALDH7A1P49419 539 aaKnown RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 MCM2P49736 904 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 NDUFV1P49821 464 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 ERVFC1P60507 584 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 KRT17Q04695 432 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 RNASELQ05823 741 aaKnown RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 NCBP1Q09161 790 aaKnown RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 PUS10Q3MIT2 529 aaKnown RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 HAUS3Q68CZ6 603 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 ASAP3Q8TDY4 903 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 PGBD4Q96DM1 585 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 TBC1D32Q96NH3 1257 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 NACC1Q96RE7 527 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 POLR3CQ9BUI4 534 aaPredicted RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 POLR3FQ9H1D9 316 aaPredicted RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 TLE6Q9H808 572 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 ENTPD7Q9NQZ7 604 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 SPG21Q9NZD8 308 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 LRWD1Q9UFC0 647 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 FAM50BQ9Y247 325 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 PCDHB6Q9Y5E3 794 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 PCDHB2Q9Y5E7 798 aa10.47□□□□□ -0.73
PDPN-204ENST00000475043 SPTBN5Q9NRC6 3674 aaKnown RBP10.47□□□□□ -0.73
PDPN-204ENST00000475043 ARHGEF35A5YM69 484 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 LRRIQ4A6NIV6 560 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 NT5C1B-RDH14C9J2C7 533 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 PER2O15055 1255 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 ZNF623O75123 536 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 ZC3H11AO75152 810 aaKnown RBP eCLIP10.46□□□□□ -0.73
PDPN-204ENST00000475043 GLRA2P23416 452 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 ARL2P36404 184 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 CCT6AP40227 531 aaKnown RBP10.46□□□□□ -0.73
PDPN-204ENST00000475043 TOB1P50616 345 aaPredicted RBP10.46□□□□□ -0.73
PDPN-204ENST00000475043 BCAR1P56945 870 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 PTENP60484 403 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 DLX2Q07687 328 aaPredicted RBP10.46□□□□□ -0.73
PDPN-204ENST00000475043 PTGDRQ13258 359 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 ADAM15Q13444 863 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 CAPSQ13938 189 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 COL19A1Q14993 1142 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 CTC1Q2NKJ3 1217 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 NOMO2Q5JPE7 1267 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 PLPP4Q5VZY2 271 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 TMC7Q7Z402 723 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 URGCPQ8TCY9 931 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
PDPN-204ENST00000475043 CPB2Q96IY4 423 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 TCF25Q9BQ70 676 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 RAB34Q9BZG1 259 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 GBP3Q9H0R5 595 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 GPRC5CQ9NQ84 441 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 DBR1Q9UK59 544 aaKnown RBP10.46□□□□□ -0.73
PDPN-204ENST00000475043 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 LZTS1Q9Y250 596 aa10.46□□□□□ -0.73
PDPN-204ENST00000475043 TSPAN1O60635 241 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms