RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 RNF19AQ9NV58 838 aa20.91■□□□□ 0.94
SYF2-203ENST00000474160 MTUS1Q9ULD2 1270 aa20.91■□□□□ 0.94
SYF2-203ENST00000474160 PCDHB12Q9Y5F1 795 aa20.91■□□□□ 0.94
SYF2-203ENST00000474160 TRANK1O15050 2925 aa20.91■□□□□ 0.94
SYF2-203ENST00000474160 MYH15Q9Y2K3 1946 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 H0YCG3 227 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 RBAK-RBAKDNI3L0D1 243 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 FGFR1P11362 822 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 ARF4P18085 180 aaPredicted RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 PLCG1P19174 1290 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 DDIT3P35638 169 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 PAN2Q504Q3 1202 aaKnown RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 UBXN11Q5T124 520 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 SLC27A1Q6PCB7 646 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 APBB1IPQ7Z5R6 666 aaPredicted RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 SPRED2Q7Z698 418 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 GDPD5Q8WTR4 605 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 SPIRE2Q8WWL2 714 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 LARP4BQ92615 738 aaKnown RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 RAD54LQ92698 747 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 MRPL38Q96DV4 380 aaKnown RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 NTPCRQ9BSD7 190 aaKnown RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 CCDC113Q9H0I3 377 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 LARSQ9P2J5 1176 aaKnown RBP20.9■□□□□ 0.94
SYF2-203ENST00000474160 KANSL3Q9P2N6 904 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 ATP6V1DQ9Y5K8 247 aa20.9■□□□□ 0.94
SYF2-203ENST00000474160 COL6A3P12111 3177 aa20.89■□□□□ 0.94
SYF2-203ENST00000474160 RFXAPO00287 272 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 N4BP3O15049 544 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 BRD1O95696 1058 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 SSBP05455 408 aaKnown RBP eCLIP20.89■□□□□ 0.93
SYF2-203ENST00000474160 IBSPP21815 317 aaPredicted RBP20.89■□□□□ 0.93
SYF2-203ENST00000474160 ABCD1P33897 745 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 SMTNP53814 917 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 UBE3AQ05086 875 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 MAPK7Q13164 816 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 KARSQ15046 597 aaKnown RBP20.89■□□□□ 0.93
SYF2-203ENST00000474160 CLLU1OSQ5K130 101 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 CCDC73Q6ZRK6 1079 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 DAW1Q8N136 415 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 RNF169Q8NCN4 708 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 SYMPKQ92797 1274 aaKnown RBP20.89■□□□□ 0.93
SYF2-203ENST00000474160 BLOC1S4Q9NUP1 217 aa20.89■□□□□ 0.93
SYF2-203ENST00000474160 PRKCBP05771 671 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 PLS3P13797 630 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 PPM1AP35813 382 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 NPTX2P47972 431 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 GATMP50440 423 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 PEX3P56589 373 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 PRPF4BQ13523 1007 aaKnown RBP20.88■□□□□ 0.93
SYF2-203ENST00000474160 TIGD5Q53EQ6 642 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 SPOUT1Q5T280 376 aaKnown RBP20.88■□□□□ 0.93
SYF2-203ENST00000474160 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 EPSTI1Q96J88 318 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 PLIN2Q99541 437 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 ADPGKQ9BRR6 497 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 TRIM6Q9C030 488 aaPredicted RBP20.88■□□□□ 0.93
SYF2-203ENST00000474160 CWH43Q9H720 699 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 KMT5AQ9NQR1 393 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 TYW1Q9NV66 732 aaKnown RBP20.88■□□□□ 0.93
SYF2-203ENST00000474160 ARHGAP28Q9P2N2 729 aa20.88■□□□□ 0.93
SYF2-203ENST00000474160 COL4A4P53420 1690 aaPredicted RBP20.88■□□□□ 0.93
SYF2-203ENST00000474160 K7ERI5 159 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 INPPL1O15357 1258 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 CUTAO60888 179 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 RRAGBQ5VZM2 374 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 URGCPQ8TCY9 931 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 HELQQ8TDG4 1101 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 CLIC6Q96NY7 704 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 RSAD1Q9HA92 442 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 GIT1Q9Y2X7 761 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 IPPQ9Y573 584 aa20.87■□□□□ 0.93
SYF2-203ENST00000474160 CCDC169A6NNP5 214 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 OFD1O75665 1012 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 ITGA4P13612 1032 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 ARSHQ5FYA8 562 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 NOMO2Q5JPE7 1267 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 AGMOQ6ZNB7 445 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 GPBP1Q86WP2 473 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 COLGALT1Q8NBJ5 622 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 SLC17A8Q8NDX2 589 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 CPB2Q96IY4 423 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 TFIP11Q9UBB9 837 aaKnown RBP20.86■□□□□ 0.93
SYF2-203ENST00000474160 PLAGL2Q9UPG8 496 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 LZTS1Q9Y250 596 aa20.86■□□□□ 0.93
SYF2-203ENST00000474160 PRRC2BQ5JSZ5 2229 aaKnown RBP20.85■□□□□ 0.93
SYF2-203ENST00000474160 ZNF131P52739 623 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 PLCB3Q01970 1234 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 PKP1Q13835 747 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 TMEM132AQ24JP5 1023 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 DCAF4L1Q3SXM0 396 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 SMG8Q8ND04 991 aaKnown RBP20.85■□□□□ 0.93
SYF2-203ENST00000474160 ZNF558Q96NG5 402 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 PARVGQ9HBI0 331 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 STK39Q9UEW8 545 aa20.85■□□□□ 0.93
SYF2-203ENST00000474160 B4GALT5O43286 388 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 NCK2O43639 380 aa20.84■□□□□ 0.93
SYF2-203ENST00000474160 KRT18P05783 430 aaKnown RBP20.84■□□□□ 0.93
SYF2-203ENST00000474160 MCM6Q14566 821 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms