RNA–Protein interactions for RNA: ENST00000473388.6

ATXN1-204, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-204ENST00000473388 SFNP31947 248 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 OR1G1P47890 313 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 RAB27AP51159 221 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 FGD1P98174 961 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 XKR3Q5GH77 459 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 GET4Q7L5D6 327 aaPredicted RBP8.31□□□□□ -1.08
ATXN1-204ENST00000473388 ZNF410Q86VK4 478 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 PALB2Q86YC2 1186 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 RASEFQ8IZ41 740 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 CCDC12Q8WUD4 166 aaPredicted RBP8.31□□□□□ -1.08
ATXN1-204ENST00000473388 SLC5A5Q92911 643 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
ATXN1-204ENST00000473388 FOXQ1Q9C009 403 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 INO80BQ9C086 356 aaPredicted RBP8.31□□□□□ -1.08
ATXN1-204ENST00000473388 PIDD1Q9HB75 910 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 WDR6Q9NNW5 1121 aaKnown RBP8.31□□□□□ -1.08
ATXN1-204ENST00000473388 MARCH5Q9NX47 278 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 VPS54Q9P1Q0 977 aa8.31□□□□□ -1.08
ATXN1-204ENST00000473388 CACNA1HO95180 2353 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 COL4A3Q01955 1670 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 CARNS1A5YM72 827 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 ZNF623O75123 536 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 GLUD1P00367 558 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 SOD2P04179 222 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 ADH1AP07327 375 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 GNA11P29992 359 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 NONOQ15233 471 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN1-204ENST00000473388 UBXN11Q5T124 520 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 RSPH1Q8WYR4 309 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 STAMQ92783 540 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 B3GALT6Q96L58 329 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 RPS6KC1Q96S38 1066 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 RIT2Q99578 217 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 TMEM175Q9BSA9 504 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 HERC2P3Q9BVR0 1158 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 SEMA4AQ9H3S1 761 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 MINDY3Q9H8M7 445 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 ARHGEF3Q9NR81 526 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 AGPAT5Q9NUQ2 364 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 EPS15L1Q9UBC2 864 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 SIT1Q9Y3P8 196 aa8.3□□□□□ -1.08
ATXN1-204ENST00000473388 DCHS1Q96JQ0 3298 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 PRPF3O43395 683 aaKnown RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 MAFO75444 373 aaPredicted RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 PSMD10O75832 226 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 KRT37O76014 449 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 TDP2O95551 362 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 SRGAP2CP0DJJ0 459 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 GLULP15104 373 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 GLUD2P49448 558 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 NPEPPSP55786 919 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 CDC42EP1Q00587 391 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 AKAP17AQ02040 695 aaKnown RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 PUM1Q14671 1186 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 DCLRE1AQ6PJP8 1040 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 ZC3H14Q6PJT7 736 aaKnown RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 Q6ZUG5 572 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 ANO5Q75V66 913 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 ZNF579Q8NAF0 562 aaKnown RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 CMASQ8NFW8 434 aaPredicted RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 BICD2Q8TD16 824 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 TBCKQ8TEA7 893 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 RUBCNQ92622 972 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 RABGGTAQ92696 567 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 BRF1Q92994 677 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 ZNF707Q96C28 371 aaPredicted RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 IFT122Q9HBG6 1241 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 DLGAP2Q9P1A6 1054 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 COL4A3BPQ9Y5P4 624 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 NUMBLQ9Y6R0 609 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 PTPRZ1P23471 2315 aaPredicted RBP8.29□□□□□ -1.08
ATXN1-204ENST00000473388 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
ATXN1-204ENST00000473388 DMDP11532 3685 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 CCDC196A0A1B0GTZ2 297 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 LAMP2P13473 410 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 ITGA4P13612 1032 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 RPL17P18621 184 aaKnown RBP8.28□□□□□ -1.08
ATXN1-204ENST00000473388 MLH1P40692 756 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 SCNN1GP51170 649 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 NLRP5P59047 1200 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 RSPO4Q2I0M5 234 aaPredicted RBP8.28□□□□□ -1.08
ATXN1-204ENST00000473388 KIAA0319Q5VV43 1072 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 ELMSAN1Q6PJG2 1045 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
ATXN1-204ENST00000473388 SKAP1Q86WV1 359 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 COLGALT2Q8IYK4 626 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 SMG8Q8ND04 991 aaKnown RBP8.28□□□□□ -1.08
ATXN1-204ENST00000473388 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 TMEM143Q96AN5 459 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 CNTNAP3BQ96NU0 1288 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 GAD1Q99259 594 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 RPP25Q9BUL9 199 aaKnown RBP8.28□□□□□ -1.08
ATXN1-204ENST00000473388 APOL6Q9BWW8 343 aa8.28□□□□□ -1.08
ATXN1-204ENST00000473388 EIF2AQ9BY44 585 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms