RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TBX20Q9UMR3 447 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 CNGA1P29973 690 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 CNTN2Q02246 1040 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 C10orf76Q5T2E6 689 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 DCAF12L1Q5VU92 463 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 NAA35Q5VZE5 725 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 ADAT2Q7Z6V5 191 aaKnown RBP16.3■□□□□ 0.2
UBXN11-213ENST00000472155 GOLGA5Q8TBA6 731 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 KREMEN1Q96MU8 473 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
UBXN11-213ENST00000472155 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 XPNPEP1Q9NQW7 623 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 CYP39A1Q9NYL5 469 aa16.3■□□□□ 0.2
UBXN11-213ENST00000472155 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 MCM3P25205 808 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 SNRNP35Q16560 246 aaKnown RBP16.29■□□□□ 0.2
UBXN11-213ENST00000472155 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
UBXN11-213ENST00000472155 INTS8Q75QN2 995 aaKnown RBP16.29■□□□□ 0.2
UBXN11-213ENST00000472155 SLFN11Q7Z7L1 901 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 VPS36Q86VN1 386 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 MSL3Q8N5Y2 521 aaKnown RBP16.29■□□□□ 0.2
UBXN11-213ENST00000472155 FAM71BQ8TC56 605 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
UBXN11-213ENST00000472155 TAF4BQ92750 862 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 PCDHB18PQ96TA0 734 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 VIPAS39Q9H9C1 493 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 TMEM59LQ9UK28 342 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 PCDHA10Q9Y5I2 948 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 CCND2P30279 289 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 JAK3P52333 1124 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 WNT7BP56706 349 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 GPS2Q13227 327 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 CCDC70Q6NSX1 233 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 CYFIP1Q7L576 1253 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 KLRG1Q96E93 195 aa16.29■□□□□ 0.2
UBXN11-213ENST00000472155 NOC2LQ9Y3T9 749 aaKnown RBP16.29■□□□□ 0.2
UBXN11-213ENST00000472155 TNFAIP3P21580 790 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 KRT76Q01546 638 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 ZNF211Q13398 564 aaPredicted RBP16.28■□□□□ 0.2
UBXN11-213ENST00000472155 TAS1R3Q7RTX0 852 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 PI4K2AQ9BTU6 479 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 GDF3Q9NR23 364 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 LCTP09848 1927 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
UBXN11-213ENST00000472155 MXI1P50539 228 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 HNRNPH2P55795 449 aaKnown RBP16.28■□□□□ 0.2
UBXN11-213ENST00000472155 ERVK-9P63128 1117 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 KIF22Q14807 665 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 SCARA3Q6AZY7 606 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 SLC47A2Q86VL8 602 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 AGPAT1Q99943 283 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
UBXN11-213ENST00000472155 GOLGA6BA6NDN3 693 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 CYP26A1O43174 497 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 CHRNB2P17787 502 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 FOXR1Q6PIV2 292 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 CATSPERGQ6ZRH7 1159 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
UBXN11-213ENST00000472155 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.2
UBXN11-213ENST00000472155 TAS1R2Q8TE23 839 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 SCFD2Q8WU76 684 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 CELF4Q9BZC1 486 aaKnown RBP16.27■□□□□ 0.2
UBXN11-213ENST00000472155 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 SEPT9Q9UHD8 586 aaPredicted RBP16.27■□□□□ 0.2
UBXN11-213ENST00000472155 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
UBXN11-213ENST00000472155 MAPTP10636 758 aaKnown RBP16.27■□□□□ 0.19
UBXN11-213ENST00000472155 ATP4AP20648 1035 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 LMNB1P20700 586 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 MARCKSL1P49006 195 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 ACTR2P61160 394 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 PPATQ06203 517 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 ARL8AQ96BM9 186 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 NEUROG2Q9H2A3 272 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.19
UBXN11-213ENST00000472155 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.19
UBXN11-213ENST00000472155 FTLP02792 175 aaPredicted RBP16.26■□□□□ 0.19
UBXN11-213ENST00000472155 DLATP10515 647 aaKnown RBP16.26■□□□□ 0.19
UBXN11-213ENST00000472155 SFNP31947 248 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 PRKCEQ02156 737 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 MTERF2Q49AM1 385 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 NSUN6Q8TEA1 469 aaKnown RBP16.26■□□□□ 0.19
UBXN11-213ENST00000472155 RFFLQ8WZ73 363 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 ALG3Q92685 438 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 TATDN2Q93075 761 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 HES6Q96HZ4 224 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 BTBD6Q96KE9 485 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 ANKEF1Q9NU02 776 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 TMEM110-MUSTN1A8MSY1 372 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 DDX3YO15523 660 aaKnown RBP16.26■□□□□ 0.19
UBXN11-213ENST00000472155 TMEM253P0C7T8 217 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 EPHB4P54760 987 aa16.26■□□□□ 0.19
UBXN11-213ENST00000472155 PPARDQ03181 441 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms