RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 FOXP1Q9H334 677 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 PRKAG3Q9UGI9 489 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 CDH22Q9UJ99 828 aa17.09■□□□□ 0.33
COL1A1-203ENST00000471344 USP15Q9Y4E8 981 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-203ENST00000471344 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 B4GALT5O43286 388 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 DGAT1O75907 488 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 DDHD2O94830 711 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 OR52Z1P0C646 297 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 SLC11A1P49279 550 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
COL1A1-203ENST00000471344 MRPL10Q7Z7H8 261 aaKnown RBP17.08■□□□□ 0.32
COL1A1-203ENST00000471344 CDR2LQ86X02 465 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-203ENST00000471344 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 CCDC43Q96MW1 224 aaKnown RBP17.08■□□□□ 0.32
COL1A1-203ENST00000471344 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 PUF60Q9UHX1 559 aaKnown RBP17.08■□□□□ 0.32
COL1A1-203ENST00000471344 HES2Q9Y543 173 aa17.08■□□□□ 0.32
COL1A1-203ENST00000471344 C2orf71A6NGG8 1288 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 ASAP2O43150 1006 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 ERLIN2O94905 339 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 GALTP07902 379 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 SKIP12755 728 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 CA8P35219 290 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 ALDH7A1P49419 539 aaKnown RBP17.07■□□□□ 0.32
COL1A1-203ENST00000471344 TOB1P50616 345 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-203ENST00000471344 KRT17Q04695 432 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 MXD4Q14582 209 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-203ENST00000471344 ECM1Q16610 540 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 TMEM31Q5JXX7 168 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
COL1A1-203ENST00000471344 C4orf32Q8N8J7 132 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 RSAD1Q9HA92 442 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 IPPQ9Y573 584 aa17.07■□□□□ 0.32
COL1A1-203ENST00000471344 POMCP01189 267 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 RNASELQ05823 741 aaKnown RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 GNL2Q13823 731 aaKnown RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 VPS52Q8N1B4 723 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 FEZF2Q8TBJ5 459 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 BSNDQ8WZ55 320 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 TMEM169Q96HH4 297 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 IGSF21Q96ID5 467 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 CDCA3Q99618 268 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 ZBP1Q9H171 429 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 NXF3Q9H4D5 531 aaKnown RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 POLD4Q9HCU8 107 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
COL1A1-203ENST00000471344 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
COL1A1-203ENST00000471344 WDFY4Q6ZS81 3184 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 TTLL13PA6NNM8 815 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-203ENST00000471344 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
COL1A1-203ENST00000471344 TFDP1Q14186 410 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 RABEP1Q15276 862 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 ANKRD54Q6NXT1 300 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 MRPL43Q8N983 215 aaKnown RBP17.05■□□□□ 0.32
COL1A1-203ENST00000471344 URGCPQ8TCY9 931 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 ZFP42Q96MM3 310 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 POLR3CQ9BUI4 534 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-203ENST00000471344 APOL6Q9BWW8 343 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 S1PR5Q9H228 398 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 MUTYHQ9UIF7 546 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 PCDHB6Q9Y5E3 794 aa17.05■□□□□ 0.32
COL1A1-203ENST00000471344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-203ENST00000471344 LRRIQ4A6NIV6 560 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 F8W810 466 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 DCXO43602 365 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 GPR37L1O60883 481 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 CLASP2O75122 1294 aaKnown RBP17.04■□□□□ 0.32
COL1A1-203ENST00000471344 CXCL14O95715 111 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL1A1-203ENST00000471344 RPA1P27694 616 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 MLH1P40692 756 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 NOTUMQ6P988 496 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 TMEM184AQ6ZMB5 413 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 RNF135Q8IUD6 432 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 SUSD6Q92537 303 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 GAD1Q99259 594 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 CSRNP2Q9H175 543 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 MIOSQ9NXC5 875 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
COL1A1-203ENST00000471344 HCFC2Q9Y5Z7 792 aa17.04■□□□□ 0.32
COL1A1-203ENST00000471344 CNTNAP2Q9UHC6 1331 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 PP2D1A8MPX8 630 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 EDN1P05305 212 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
COL1A1-203ENST00000471344 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
COL1A1-203ENST00000471344 ITGA4P13612 1032 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 SP100P23497 879 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-203ENST00000471344 SCNN1GP51170 649 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 POU5F1BQ06416 359 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms