RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 STK39Q9UEW8 545 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 ATP6V1DQ9Y5K8 247 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 PLXNA3P51805 1871 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 DENND4AQ7Z401 1863 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 TCHHQ07283 1943 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 CYP3A7-CYP3A51PA0A087WV96 503 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 A0A087WZ62 844 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 MAFO75444 373 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 GALTP07902 379 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 EPCAMP16422 314 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 CYP3A7P24462 503 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 CA8P35219 290 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 KRT2P35908 639 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 NBL1P41271 181 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 DNM2P50570 870 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 GNL2Q13823 731 aaKnown RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 PTPN14Q15678 1187 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 MTERF2Q49AM1 385 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 NOMO2Q5JPE7 1267 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 RARS2Q5T160 578 aaKnown RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 TWF2Q6IBS0 349 aaKnown RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 MOXD1Q6UVY6 613 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 BRAPQ7Z569 592 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 PPFIBP1Q86W92 1011 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 C12orf76Q8N812 135 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 TMEM105Q8N8V8 129 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 DAGLBQ8NCG7 672 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 SLC22A17Q8WUG5 538 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 BCL7CQ8WUZ0 217 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 AUTS2Q8WXX7 1259 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 LPPQ93052 612 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 MBOAT7Q96N66 472 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 FDXACB1Q9BRP7 624 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 NRDE2Q9H7Z3 1164 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 FAM105AQ9NUU6 356 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 KCNJ14Q9UNX9 436 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 PIN4Q9Y237 131 aaKnown RBP10.13□□□□□ -0.79
SF3A1-206ENST00000471037 ZDHHC9Q9Y397 364 aa10.13□□□□□ -0.79
SF3A1-206ENST00000471037 MYO15AQ9UKN7 3530 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 TMEM150BA6NC51 233 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 MEIS3P2A8K0S8 358 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 OFD1O75665 1012 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 ASGR2P07307 311 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 WEE2P0C1S8 567 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.794e-7■■□□□ 12
SF3A1-206ENST00000471037 CLCN5P51795 746 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 RESTQ13127 1097 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 NPY5RQ15761 445 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 MCTP1Q6DN14 999 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-206ENST00000471037 ANO5Q75V66 913 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 CATSPER4Q7RTX7 472 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 GPR149Q86SP6 731 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 RHPN2Q8IUC4 686 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
SF3A1-206ENST00000471037 BLIDQ8IZY5 108 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 TMEM87AQ8NBN3 555 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 ETNPPLQ8TBG4 499 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 GJA10Q969M2 543 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 JPH2Q9BR39 696 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-206ENST00000471037 VN1R3Q9BXE9 311 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 SMOC2Q9H3U7 446 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 SFXN1Q9H9B4 322 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 IFT122Q9HBG6 1241 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 CYP26B1Q9NR63 512 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 SUCLA2Q9P2R7 463 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-206ENST00000471037 DNAJB4Q9UDY4 337 aa10.12□□□□□ -0.79
SF3A1-206ENST00000471037 DBR1Q9UK59 544 aaKnown RBP10.12□□□□□ -0.79
SF3A1-206ENST00000471037 PRR23AA6NEV1 266 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 M0R2N6 131 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 B4GALT3O60512 393 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 LILRB3O75022 631 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 TDP2O95551 362 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 SLC11A1P49279 550 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 CLCN4P51793 760 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 PSMC5P62195 406 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 RNASELQ05823 741 aaKnown RBP10.11□□□□□ -0.79
SF3A1-206ENST00000471037 FOXD4L5Q5VV16 416 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-206ENST00000471037 KANK3Q6NY19 840 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 AGMOQ6ZNB7 445 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 C15orf39Q6ZRI6 1047 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 CCDC149Q6ZUS6 474 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 OTOP3Q7RTS5 596 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 MRPL10Q7Z7H8 261 aaKnown RBP10.11□□□□□ -0.79
SF3A1-206ENST00000471037 FERMT3Q86UX7 667 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 CABP7Q86V35 215 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 FOXD4L4Q8WXT5 416 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-206ENST00000471037 ACSF2Q96CM8 615 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-206ENST00000471037 PGBD4Q96DM1 585 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 SH2D3AQ9BRG2 576 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 TMEM175Q9BSA9 504 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 LIMD1Q9UGP4 676 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 INPP5FQ9Y2H2 1132 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 PPME1Q9Y570 386 aa10.11□□□□□ -0.79
SF3A1-206ENST00000471037 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms