RNA–Protein interactions for RNA: ENST00000470575.5

SFMBT1-202, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-202ENST00000470575 POTEDQ86YR6 584 aa20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 CEP170P1Q96L14 293 aa20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 VN1R3Q9BXE9 311 aa20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 FOXP1Q9H334 677 aaPredicted RBP20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 MINDY3Q9H8M7 445 aa20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 AGPAT5Q9NUQ2 364 aa20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 COL4A3BPQ9Y5P4 624 aa20.32■□□□□ 0.84
SFMBT1-202ENST00000470575 CCNT1O60563 726 aaKnown RBP20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 OFD1O75665 1012 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 EPCAMP16422 314 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 HOXB8P17481 243 aaPredicted RBP20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 SLC11A1P49279 550 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 POLGP54098 1239 aaPredicted RBP20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 RNASELQ05823 741 aaKnown RBP20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 NCAPH2Q6IBW4 605 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 ZNF280BQ86YH2 543 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 FBXL6Q8N531 539 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 HAS1Q92839 578 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 IGSF21Q96ID5 467 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 LXNQ9BS40 222 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 TRAIPQ9BWF2 469 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 INO80BQ9C086 356 aaPredicted RBP20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 RGL1Q9NZL6 768 aa20.31■□□□□ 0.84
SFMBT1-202ENST00000470575 H3BQV1 296 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 SSBP05455 408 aaKnown RBP eCLIP20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 GALTP07902 379 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 SRGAP2CP0DJJ0 459 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 PDCP20941 246 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 CDC42EP1Q00587 391 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 CYP4A11Q02928 519 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 CES5AQ6NT32 575 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 AGMOQ6ZNB7 445 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 SLC7A3Q8WY07 619 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 ADAM7Q9H2U9 754 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 PCDHB2Q9Y5E7 798 aa20.3■□□□□ 0.84
SFMBT1-202ENST00000470575 ZBTB39O15060 712 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 CTSAP10619 480 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 RAB27AP51159 221 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 TCF15Q12870 199 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 EMC2Q15006 297 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 DDX53Q86TM3 631 aaKnown RBP20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 KREMEN2Q8NCW0 462 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 PRPF31Q8WWY3 499 aaKnown RBP20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 DYDC2Q96IM9 177 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 JPH2Q9BR39 696 aaPredicted RBP20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 DHX33Q9H6R0 707 aaKnown RBP20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 ARID2Q68CP9 1835 aa20.29■□□□□ 0.84
SFMBT1-202ENST00000470575 DDHD2O94830 711 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 P4HBP07237 508 aaKnown RBP20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 ASGR2P07307 311 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 SKIP12755 728 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 U2AF2P26368 475 aaKnown RBP eCLIP20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 YWHABP31946 246 aaKnown RBP20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 LAMTOR4Q0VGL1 99 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 GNL2Q13823 731 aaKnown RBP20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 BECN1Q14457 450 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 PSPC1Q8WXF1 523 aaKnown RBP20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 FAM20AQ96MK3 541 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 FAM86C1Q9NVL1 165 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 NR2E1Q9Y466 385 aa20.28■□□□□ 0.84
SFMBT1-202ENST00000470575 MARCH6O60337 910 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 ZNF623O75123 536 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 BRD1O95696 1058 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 POMCP01189 267 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 GCFC2P16383 781 aaKnown RBP20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 ITIH3Q06033 890 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 PTPN14Q15678 1187 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 PPP4R3AQ6IN85 833 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 NOSTRINQ8IVI9 506 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 RNF149Q8NC42 400 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 SLC22A17Q8WUG5 538 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 NAP1L4Q99733 375 aaKnown RBP20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 RSAD1Q9HA92 442 aa20.27■□□□□ 0.84
SFMBT1-202ENST00000470575 PIEZO1Q92508 2521 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 HOXA11P31270 313 aaPredicted RBP20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 RFC5P40937 340 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 PTPN5P54829 565 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 SPIRE1Q08AE8 756 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 BMS1Q14692 1282 aaKnown RBP20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 EPHA7Q15375 998 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 XKR9Q5GH70 373 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 MCTP1Q6DN14 999 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 TMC5Q6UXY8 1006 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 C4orf19Q8IY42 314 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 PGBD4Q96DM1 585 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 NECTIN4Q96NY8 510 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 ZDBF2Q9HCK1 2354 aa20.26■□□□□ 0.83
SFMBT1-202ENST00000470575 DKC1O60832 514 aaKnown RBP eCLIP20.25■□□□□ 0.83
SFMBT1-202ENST00000470575 SYT1P21579 422 aa20.25■□□□□ 0.83
SFMBT1-202ENST00000470575 MTHFRP42898 656 aa20.25■□□□□ 0.83
SFMBT1-202ENST00000470575 KIAA1841Q6NSI8 718 aa20.25■□□□□ 0.83
SFMBT1-202ENST00000470575 SRGAP1Q7Z6B7 1085 aa20.25■□□□□ 0.83
SFMBT1-202ENST00000470575 FERMT3Q86UX7 667 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms