RNA–Protein interactions for RNA: ENST00000470352.1

RPN2-208, Transcript of ribophorin II, human

TSL 2

Gene RPN2, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPN2-208	ENST00000470352	RAD54L	Q92698	747 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	CASD1	Q96PB1	797 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	CCDC113	Q9H0I3	377 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	FZD8	Q9H461	694 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	BLOC1S4	Q9NUP1	217 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	RNF19A	Q9NV58	838 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	LMCD1	Q9NZU5	365 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	TFIP11	Q9UBB9	837 aa	Known RBP	13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	DAXX	Q9UER7	740 aa	Predicted RBP	13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	KCNG1	Q9UIX4	513 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	ODF2L	Q9ULJ1	636 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	PCDHB2	Q9Y5E7	798 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	ATP6V1D	Q9Y5K8	247 aa		13.37	□□□□□ -0.27
RPN2-208	ENST00000470352	TRANK1	O15050	2925 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	CCDC169	A6NNP5	214 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352		H3BNC9	293 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	RFXAP	O00287	272 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	B4GALT5	O43286	388 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	LPXN	O60711	386 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	CUTA	O60888	179 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	PRKCB	P05771	671 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	NPTX2	P47972	431 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	PEX3	P56589	373 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	RAD51AP2	Q09MP3	1159 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	NAALADL2	Q58DX5	795 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	CLLU1OS	Q5K130	101 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	UBXN11	Q5T124	520 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	SLC27A1	Q6PCB7	646 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	GLB1L	Q6UWU2	654 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	CCDC73	Q6ZRK6	1079 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	USP49	Q70CQ1	688 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	MRPL10	Q7Z7H8	261 aa	Known RBP	13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	GPBP1	Q86WP2	473 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	HELQ	Q8TDG4	1101 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	LRRC15	Q8TF66	581 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	P2RX5	Q93086	422 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	CPB2	Q96IY4	423 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	KIFC3	Q9BVG8	833 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	TRIM6	Q9C030	488 aa	Predicted RBP	13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	UBN1	Q9NPG3	1134 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	AAAS	Q9NRG9	546 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	LARS	Q9P2J5	1176 aa	Known RBP	13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	RBM19	Q9Y4C8	960 aa	Known RBP	13.36	□□□□□ -0.27
RPN2-208	ENST00000470352	KIAA1671	Q9BY89	1806 aa		13.36	□□□□□ -0.27
RPN2-208	ENST00000470352		A0A1B0GUA9	196 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	ACKR2	O00590	384 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	N4BP3	O15049	544 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	PLS3	P13797	630 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	LAG3	P18627	525 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	NCL	P19338	710 aa	Known RBP	13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	DDIT3	P35638	169 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	SMTN	P53814	917 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	DNM1	Q05193	864 aa	Known RBP	13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	GPM6B	Q13491	265 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	PRPF4B	Q13523	1007 aa	Known RBP	13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	MCM6	Q14566	821 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	PTPRO	Q16827	1216 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	CSPP1	Q1MSJ5	1256 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	TMEM132A	Q24JP5	1023 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	ARSH	Q5FYA8	562 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	SPOUT1	Q5T280	376 aa	Known RBP	13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	RRAGB	Q5VZM2	374 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	HACE1	Q8IYU2	909 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	SPIRE2	Q8WWL2	714 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	REEP2	Q9BRK0	252 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	EIF2A	Q9BY44	585 aa	Known RBP	13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	RSAD1	Q9HA92	442 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	POLD4	Q9HCU8	107 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	KMT5A	Q9NQR1	393 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	ARHGAP28	Q9P2N2	729 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	MTCH2	Q9Y6C9	303 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	MYO9B	Q13459	2157 aa		13.35	□□□□□ -0.27
RPN2-208	ENST00000470352	ZMYM2	Q9UBW7	1377 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	CARNS1	A5YM72	827 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352		H0YCG3	227 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352		K7ERI5	159 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	TBCA	O75347	108 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	KRT18	P05783	430 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	LIG1	P18858	919 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	SCP2	P22307	547 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	STAT6	P42226	847 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	KRT85	P78386	507 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	DHX8	Q14562	1220 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	SMG8	Q8ND04	991 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	URGCP	Q8TCY9	931 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	LPP	Q93052	612 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	MRPL38	Q96DV4	380 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	ADPGK	Q9BRR6	497 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	NTPCR	Q9BSD7	190 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	LMAN2L	Q9H0V9	348 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	TMEM134	Q9H6X4	195 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	TYW1	Q9NV66	732 aa	Known RBP	13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	ZDHHC9	Q9Y397	364 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	IPP	Q9Y573	584 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	PCDHB12	Q9Y5F1	795 aa		13.34	□□□□□ -0.27
RPN2-208	ENST00000470352	COL6A3	P12111	3177 aa		13.33	□□□□□ -0.28
RPN2-208	ENST00000470352	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms