RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 DRD4P21917 467 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SP100P23497 879 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ATP5DP30049 168 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CD68P34810 354 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 RGS2P41220 211 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 MSH2P43246 934 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CD97P48960 835 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TRPC1P48995 793 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SARSP49591 514 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 PEX5P50542 639 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 RHBDL3P58872 404 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 OCRLQ01968 901 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 GUCY1A3Q02108 690 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 RNASELQ05823 741 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CBX3Q13185 183 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 LSAMPQ13449 338 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CYLC2Q14093 348 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 MORC3Q14149 939 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SPA17Q15506 151 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 NDUFA5Q16718 116 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ADCK5Q3MIX3 580 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 LONRF3Q496Y0 759 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 C4orf46Q504U0 113 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SLC44A4Q53GD3 710 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 FIGNQ5HY92 759 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CCDC122Q5T0U0 273 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 AKNAD1Q5T1N1 836 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 RESP18Q5W5W9 173 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 FAM173BQ6P4H8 233 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM154Q6P9G4 183 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SLC4A10Q6U841 1118 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 Q6ZUG5 572 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TAOK1Q7L7X3 1001 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF438Q7Z4V0 828 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 PHLDB2Q86SQ0 1253 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 STK11IPQ8N1F8 1099 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CNBD1Q8NA66 436 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SPATA4Q8NEY3 305 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TRPC4APQ8TEL6 797 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 WDR60Q8WVS4 1066 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DNAJC9Q8WXX5 260 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SLC7A3Q8WY07 619 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 EDEM1Q92611 657 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DPF2Q92785 391 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 INPP5DQ92835 1189 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ARL8AQ96BM9 186 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 HAUS1Q96CS2 278 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 KLHL29Q96CT2 875 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DHTKD1Q96HY7 919 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 C8orf76Q96K31 380 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CCDC43Q96MW1 224 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 GSDMAQ96QA5 445 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TUBGCP5Q96RT8 1024 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CDC5LQ99459 802 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DUSP9Q99956 384 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DESI2Q9BSY9 194 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 RBCK1Q9BYM8 510 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DCLRE1BQ9H816 532 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ELP3Q9H9T3 547 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SPC25Q9HBM1 224 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 PPANQ9NQ55 473 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 JADE2Q9NQC1 790 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ATP8A2Q9NTI2 1148 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CNTN3Q9P232 1028 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 DKK3Q9UBP4 350 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 ADD3Q9UEY8 706 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 TUBGCP4Q9UGJ1 667 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 CROTQ9UKG9 612 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 RNF112Q9ULX5 631 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 INPP5FQ9Y2H2 1132 aa5.25□□□□□ -1.57
SF3B1-207ENST00000468925 FNDC3AQ9Y2H6 1198 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 BZW2Q9Y6E2 419 aaKnown RBP5.25□□□□□ -1.57
SF3B1-207ENST00000468925 NEDD4P46934 1319 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 NCAPD2Q15021 1401 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 A0A1W2PQJ5 194 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF233A6NK53 670 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CCDC169A6NNP5 214 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 FSCN2O14926 492 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 TTI1O43156 1089 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 SH3BP5O60239 455 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ECE2O60344 883 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CBFA2T3O75081 653 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 SURF6O75683 361 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF189O75820 626 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 TGFB1P01137 390 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 HOXD8P13378 290 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 IDEP14735 1019 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 GNAZP19086 355 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 CYP11B2P19099 503 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 POLR2EP19388 210 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 EIF4BP23588 611 aaKnown RBP5.24□□□□□ -1.57
SF3B1-207ENST00000468925 PAX3P23760 479 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 GSTT1P30711 240 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 VHLP40337 213 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 HSPA2P54652 639 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 POLE2P56282 527 aa5.24□□□□□ -1.57
SF3B1-207ENST00000468925 DAB2P98082 770 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms