RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 LAMTOR4Q0VGL1 99 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 NCAPH2Q6IBW4 605 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 AGMOQ6ZNB7 445 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 OTUD6AQ7L8S5 288 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 SRGAP1Q7Z6B7 1085 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 ZNF280BQ86YH2 543 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 C4orf19Q8IY42 314 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 C12orf76Q8N812 135 aaPredicted RBP19.29■□□□□ 0.68
TRIM56-203ENST00000467847 KREMEN2Q8NCW0 462 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 OXER1Q8TDS5 423 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 MINDY3Q9H8M7 445 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 CACNA1HO95180 2353 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 B4GALT3O60512 393 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 DTNBO60941 627 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 VCPP55072 806 aaKnown RBP19.28■□□□□ 0.68
TRIM56-203ENST00000467847 MTMR3Q13615 1198 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 EMC2Q15006 297 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 EPHA7Q15375 998 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 KANK3Q6NY19 840 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 POTEDQ86YR6 584 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 SLC22A17Q8WUG5 538 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 TCP11Q8WWU5 503 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 VN1R3Q9BXE9 311 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 RSAD1Q9HA92 442 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 RGL1Q9NZL6 768 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 TPCN1Q9ULQ1 816 aa19.28■□□□□ 0.68
TRIM56-203ENST00000467847 CNTNAP2Q9UHC6 1331 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 GAS2O43903 313 aaKnown RBP19.27■□□□□ 0.68
TRIM56-203ENST00000467847 PFKFB2O60825 505 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 HOXA11P31270 313 aaPredicted RBP19.27■□□□□ 0.68
TRIM56-203ENST00000467847 PTPN14Q15678 1187 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 XKR9Q5GH70 373 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 ATAT1Q5SQI0 421 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 KIAA1841Q6NSI8 718 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 MRPL10Q7Z7H8 261 aaKnown RBP19.27■□□□□ 0.68
TRIM56-203ENST00000467847 CABP7Q86V35 215 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 PPFIBP1Q86W92 1011 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 UBALD2Q8IYN6 164 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 TDRD5Q8NAT2 981 aaKnown RBP19.27■□□□□ 0.68
TRIM56-203ENST00000467847 RNF149Q8NC42 400 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 DYDC2Q96IM9 177 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 FAM193BQ96PV7 902 aaPredicted RBP19.27■□□□□ 0.68
TRIM56-203ENST00000467847 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 KANSL3Q9P2N6 904 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 STK39Q9UEW8 545 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 DBR1Q9UK59 544 aaKnown RBP19.27■□□□□ 0.68
TRIM56-203ENST00000467847 SORCS3Q9UPU3 1222 aa19.27■□□□□ 0.68
TRIM56-203ENST00000467847 SPDYE4A6NLX3 237 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 ASAP2O43150 1006 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 DDHD2O94830 711 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 ERLIN2O94905 339 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
TRIM56-203ENST00000467847 SSBP05455 408 aaKnown RBP eCLIP19.26■□□□□ 0.67
TRIM56-203ENST00000467847 AVPR2P30518 371 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 AFF1P51825 1210 aaKnown RBP19.26■□□□□ 0.67
TRIM56-203ENST00000467847 CYP4A11Q02928 519 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 CTTNQ14247 550 aaKnown RBP19.26■□□□□ 0.67
TRIM56-203ENST00000467847 EARS2Q5JPH6 523 aaKnown RBP19.26■□□□□ 0.67
TRIM56-203ENST00000467847 UBXN11Q5T124 520 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 FERMT3Q86UX7 667 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 SLFN12Q8IYM2 578 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 WASF1Q92558 559 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 EMILIN2Q9BXX0 1053 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 ORC3Q9UBD5 711 aaPredicted RBP19.26■□□□□ 0.67
TRIM56-203ENST00000467847 DENND4AQ7Z401 1863 aa19.26■□□□□ 0.67
TRIM56-203ENST00000467847 FAM205CA6NFA0 338 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 ZBTB39O15060 712 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 CTDNEP1O95476 244 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 BRD1O95696 1058 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 PDGFBP01127 241 aaPredicted RBP19.25■□□□□ 0.67
TRIM56-203ENST00000467847 POMCP01189 267 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 ALDH2P05091 517 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 SPIRE1Q08AE8 756 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 TMC5Q6UXY8 1006 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 TPH2Q8IWU9 490 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 MTRQ99707 1265 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 TMEM175Q9BSA9 504 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 FAN1Q9Y2M0 1017 aa19.25■□□□□ 0.67
TRIM56-203ENST00000467847 ASGR2P07307 311 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
TRIM56-203ENST00000467847 KLRC2P26717 231 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 KRT2P35908 639 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 NR5A1Q13285 461 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 ANKRD1Q15327 319 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 ZDHHC14Q8IZN3 488 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 CNNM3Q8NE01 707 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 KLHL5Q96PQ7 755 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 SFXN1Q9H9B4 322 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 BRMS1Q9HCU9 246 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 UBN1Q9NPG3 1134 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 MRPL17Q9NRX2 175 aaKnown RBP19.24■□□□□ 0.67
TRIM56-203ENST00000467847 LIMD1Q9UGP4 676 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 C2orf16Q68DN1 1984 aa19.24■□□□□ 0.67
TRIM56-203ENST00000467847 TDRD15B5MCY1 1934 aaKnown RBP19.23■□□□□ 0.67
TRIM56-203ENST00000467847 H0Y858 1186 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 NRP1O14786 923 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 TSPAN1O60635 241 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 SLITRK3O94933 977 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 CNPP09543 421 aaKnown RBP19.23■□□□□ 0.67
TRIM56-203ENST00000467847 ITGA4P13612 1032 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms