RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 ZDBF2Q9HCK1 2354 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 BRWD1Q9NSI6 2320 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 COL11A1P12107 1806 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 ZNF536O15090 1300 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 TNKSO95271 1327 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 DNAJC25-GNG10A0A024R161 153 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 TCAF2A6NFQ2 919 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ZEB2O60315 1214 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 BAIAP3O94812 1187 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 SNAI1O95863 264 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-207ENST00000467273 PGK2P07205 417 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ATF4P18848 351 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-207ENST00000467273 BMP6P22004 513 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 GUCY1A2P33402 732 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 SHMT1P34896 483 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 STAT3P40763 770 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 LMNB2Q03252 620 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 PPP2R3AQ06190 1150 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 GABPAQ06546 454 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 TFCP2Q12800 502 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 DDX10Q13206 875 aaKnown RBP6.52□□□□□ -1.37
PTCD3-207ENST00000467273 GRB10Q13322 594 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 MTX1Q13505 466 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ITGA7Q13683 1181 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ACVR2BQ13705 512 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 TMEM179Q6ZVK1 233 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 BMP8AQ7Z5Y6 402 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 MCF2L2Q86YR7 1114 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 STK35Q8TDR2 534 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ARNTL2Q8WYA1 636 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 KCNB2Q92953 911 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ATG4CQ96DT6 458 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 NEUROD6Q96NK8 337 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 WNT8AQ9H1J5 351 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 SAP30BPQ9UHR5 308 aaKnown RBP6.52□□□□□ -1.37
PTCD3-207ENST00000467273 ZNF214Q9UL59 606 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-207ENST00000467273 PA2G4Q9UQ80 394 aaKnown RBP6.52□□□□□ -1.37
PTCD3-207ENST00000467273 TMX2Q9Y320 296 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 SPTBN4Q9H254 2564 aa6.52□□□□□ -1.37
PTCD3-207ENST00000467273 A0A1W2PRG0 241 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 MYADML2A6NDP7 307 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 EPOPA6NHQ4 379 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 RFXAPO00287 272 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 VWA5AO00534 786 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 ATP2A1O14983 1001 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 CTAGE5O15320 804 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 LPXNO60711 386 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 GTF2F1P35269 517 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTCD3-207ENST00000467273 CCL23P55773 120 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 IRX6P78412 446 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-207ENST00000467273 SEPT2Q15019 361 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 NKPD1Q17RQ9 610 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 CCDC144BQ3MJ40 725 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 KRT40Q6A162 431 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 ADGRA1Q86SQ6 560 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 HERC6Q8IVU3 1022 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 GOLM1Q8NBJ4 401 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-207ENST00000467273 RASGRP4Q8TDF6 673 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 DDX11Q96FC9 970 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 TEX13BQ9BXU2 312 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 VCPKMTQ9H867 229 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 DCP1AQ9NPI6 582 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-207ENST00000467273 GPR108Q9NPR9 543 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 CTNNA3Q9UI47 895 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 ZHX1Q9UKY1 873 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-207ENST00000467273 Q9Y3F1 56 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
PTCD3-207ENST00000467273 UMODL1Q5DID0 1318 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 NUAK1O60285 661 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 B4GALT4O60513 344 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 GREM1O60565 184 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 FGRP09769 529 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 NME2P22392 152 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 CLCN7P51798 805 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 RPS26P62854 115 aaKnown RBP6.5□□□□□ -1.37
PTCD3-207ENST00000467273 LRRFIP1Q32MZ4 808 aaKnown RBP6.5□□□□□ -1.37
PTCD3-207ENST00000467273 HERC4Q5GLZ8 1057 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-207ENST00000467273 CCDC158Q5M9N0 1113 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 SNAP47Q5SQN1 464 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 NEK9Q8TD19 979 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 DNAJC2Q99543 621 aaKnown RBP6.5□□□□□ -1.37
PTCD3-207ENST00000467273 UBP1Q9NZI7 540 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 SWAP70Q9UH65 585 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 FBXO40Q9UH90 709 aa6.5□□□□□ -1.37
PTCD3-207ENST00000467273 SUPT16HQ9Y5B9 1047 aaKnown RBP6.5□□□□□ -1.37
PTCD3-207ENST00000467273 TANC1Q9C0D5 1861 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ZFHX2Q9C0A1 2572 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-207ENST00000467273 MYH8P13535 1937 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 SIP14410 1827 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 SRGAP3O43295 1099 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ADCY6O43306 1168 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
PTCD3-207ENST00000467273 IL9P15248 144 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 HOXA5P20719 270 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 KCNA5P22460 613 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms