RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DNAJB4Q9UDY4 337 aa14.45□□□□□ -0.1
UBR4-210ENST00000466969 INPP5FQ9Y2H2 1132 aa14.45□□□□□ -0.1
UBR4-210ENST00000466969 RAXQ9Y2V3 346 aa14.45□□□□□ -0.1
UBR4-210ENST00000466969 SHROOM3Q8TF72 1996 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 LNP1A1A4G5 178 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 TGM5O43548 720 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 ATP9AO75110 1047 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 CAVIN2O95810 425 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 C1RP00736 705 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 FGRP09769 529 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 CHRNB1P11230 501 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 NTHL1P78549 312 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 SIM1P81133 766 aaPredicted RBP14.44□□□□□ -0.1
UBR4-210ENST00000466969 LRRC32Q14392 662 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 NOMO2Q5JPE7 1267 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 GLB1LQ6UWU2 654 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 CHCHD4Q8N4Q1 142 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 SEC62Q99442 399 aaKnown RBP14.44□□□□□ -0.1
UBR4-210ENST00000466969 PCYT2Q99447 389 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 BRD9Q9H8M2 597 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 DACT1Q9NYF0 836 aa14.44□□□□□ -0.1
UBR4-210ENST00000466969 FRMPD4Q14CM0 1322 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 MTCL1Q9Y4B5 1905 aaKnown RBP14.43□□□□□ -0.1
UBR4-210ENST00000466969 DOCK6Q96HP0 2047 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 ZMYND10O75800 440 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 ALDH2P05091 517 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 KCNA2P16389 499 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 GLUD2P49448 558 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 CREB5Q02930 508 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 TRAF1Q13077 416 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 PTGDRQ13258 359 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
UBR4-210ENST00000466969 PNMA1Q8ND90 353 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 HERC2P3Q9BVR0 1158 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 RXFP1Q9HBX9 757 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 FAN1Q9Y2M0 1017 aa14.43□□□□□ -0.1
UBR4-210ENST00000466969 APC2O95996 2303 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 SPAARA0A1B0GVQ0 90 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 ATXN7O15265 892 aaPredicted RBP14.42□□□□□ -0.1
UBR4-210ENST00000466969 RAB11FIP3O75154 756 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 GPR32O75388 356 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 VTNP04004 478 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 NTRK1P04629 796 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 PARP1P09874 1014 aaKnown RBP14.42□□□□□ -0.1
UBR4-210ENST00000466969 STAT5BP51692 787 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 PCNX4Q63HM2 1172 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 ZNF843Q8N446 348 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 ITFG1Q8TB96 612 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 GPRASP2Q96D09 838 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 ZC3H10Q96K80 434 aaKnown RBP14.42□□□□□ -0.1
UBR4-210ENST00000466969 FAM193BQ96PV7 902 aaPredicted RBP14.42□□□□□ -0.1
UBR4-210ENST00000466969 PLA2G2FQ9BZM2 168 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 POLIQ9UNA4 740 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 PIAS3Q9Y6X2 628 aa14.42□□□□□ -0.1
UBR4-210ENST00000466969 ZBTB5O15062 677 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 AKAP3O75969 853 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 ELF2Q15723 593 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 IRF7Q92985 503 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 KAT14Q9H8E8 782 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 URB1O60287 2271 aaKnown RBP14.41□□□□□ -0.1
UBR4-210ENST00000466969 PCNX2A6NKB5 2137 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 EVPLQ92817 2033 aa14.41□□□□□ -0.1
UBR4-210ENST00000466969 ZNF316A6NFI3 1004 aaPredicted RBP14.4□□□□□ -0.1
UBR4-210ENST00000466969 KHNYNO15037 678 aaKnown RBP14.4□□□□□ -0.1
UBR4-210ENST00000466969 HBP1O60381 514 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 PPP1R11O60927 126 aaPredicted RBP14.4□□□□□ -0.1
UBR4-210ENST00000466969 SLC26A2P50443 739 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 KCNC4Q03721 635 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 SRSF1Q07955 248 aaKnown RBP eCLIP14.4□□□□□ -0.17e-7■■■■□ 22
UBR4-210ENST00000466969 LONRF3Q496Y0 759 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 ZKSCAN2Q63HK3 967 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 DGKHQ86XP1 1220 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 ZNF280BQ86YH2 543 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 GLYCTKQ8IVS8 523 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 NPAS3Q8IXF0 933 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
UBR4-210ENST00000466969 MDM1Q8TC05 714 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 URGCPQ8TCY9 931 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 LPPQ93052 612 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 TMEM175Q9BSA9 504 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 JPH1Q9HDC5 661 aaPredicted RBP14.4□□□□□ -0.1
UBR4-210ENST00000466969 JADE2Q9NQC1 790 aa14.4□□□□□ -0.1
UBR4-210ENST00000466969 CCDC163A0A0D9SF12 145 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 CAPN8A6NHC0 703 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 CDX4O14627 284 aaPredicted RBP14.39□□□□□ -0.11
UBR4-210ENST00000466969 NRP1O14786 923 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 XYLBO75191 536 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 RHOBTB1O94844 696 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 HNRNPA1P09651 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBR4-210ENST00000466969 SKIP12755 728 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 EIF4BP23588 611 aaKnown RBP14.39□□□□□ -0.11
UBR4-210ENST00000466969 CCNE1P24864 410 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 GRM2Q14416 872 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 PLK5Q496M5 336 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 LIN9Q5TKA1 542 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 TAS1R1Q7RTX1 841 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms