RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ABHD8Q96I13 439 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 STRBPQ96SI9 672 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 NOL10Q9BSC4 688 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 CDADC1Q9BWV3 514 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 BACH2Q9BYV9 841 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 PRR13Q9NZ81 148 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 PI4KBQ9UBF8 816 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 STAP2Q9UGK3 403 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 RAPGEFL1Q9UHV5 662 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 TTC41PQ6P2S7 1318 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 PDHXO00330 501 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 GH2P01242 217 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 EPHB3P54753 998 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 HMGCS2P54868 508 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 ERVFRD-1P60508 538 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 YBX1P67809 324 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 SPP2Q13103 211 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 ZNF394Q53GI3 561 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 ZNF385BQ569K4 471 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 KIAA1755Q5JYT7 1200 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 GALNT18Q6P9A2 607 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 CTR9Q6PD62 1173 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 GADL1Q6ZQY3 521 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 OTOP1Q7RTM1 612 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 SLCO6A1Q86UG4 719 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 CHD1LQ86WJ1 897 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 FOXP4Q8IVH2 680 aaPredicted RBP5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 C7orf61Q8IZ16 206 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 TMEM52Q8NDY8 209 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 CRNKL1Q9BZJ0 848 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 DHX36Q9H2U1 1008 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 RWDD1Q9H446 243 aaPredicted RBP5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 CNTD2Q9H8S5 307 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 AP5S1Q9NUS5 200 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 SIRT5Q9NXA8 310 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 MCM9Q9NXL9 1143 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 CPA4Q9UI42 421 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 HERC5Q9UII4 1024 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 ZBTB21Q9ULJ3 1066 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 PCDHGB7Q9Y5F8 929 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 TAF6LQ9Y6J9 622 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 SLC4A4Q9Y6R1 1079 aa5.75□□□□□ -1.49
EXOSC3-204ENST00000465860 A0A0D9SFI3 127 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 A0A1W2PRG0 241 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 CXCL11O14625 94 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 GPAA1O43292 621 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 TLR2O60603 784 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 IGSF3O75054 1194 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 GLRX3O76003 335 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 AKR1B1P15121 316 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 PI3P19957 117 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 ENDOUP21128 410 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 FANCCQ00597 558 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 SEPT2Q15019 361 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 ZYXQ15942 572 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 RTP2Q5QGT7 225 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 C12orf60Q5U649 245 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 VPS53Q5VIR6 699 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 TDRD10Q5VZ19 366 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 C17orf99Q6UX52 265 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 CTU1Q7Z7A3 348 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 ANKRD23Q86SG2 305 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 ZNF589Q86UQ0 364 aaPredicted RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 PPFIBP1Q86W92 1011 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 CCDC144CPQ8IYA2 1237 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 CRACR2BQ8N4Y2 399 aaPredicted RBP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 ACER1Q8TDN7 264 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 APPBP2Q92624 585 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 SIGLEC10Q96LC7 697 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 DHRS1Q96LJ7 313 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 C20orf173Q96LM9 149 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 FAM227BQ96M60 508 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 FSD1Q9BTV5 496 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 IL25Q9H293 177 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 INCENPQ9NQS7 918 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 KLHL14Q9P2G3 628 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 SERPINB13Q9UIV8 391 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 LAMA4Q16363 1823 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 A0A0G2JMZ2 1700 aa5.74□□□□□ -1.49
EXOSC3-204ENST00000465860 RBBP6Q7Z6E9 1792 aaKnown RBP5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 KIAA0100Q14667 2235 aaKnown RBP5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 A0A1W2PQ45 241 aaPredicted RBP5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 A0A1W2PQY0 241 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 N4BP3O15049 544 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 ERC2O15083 957 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 HLA-DOAP06340 250 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 GSNP06396 782 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 IMPDH2P12268 514 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 GSPT1P15170 499 aaKnown RBP5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 PRKCAP17252 672 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 BMP7P18075 431 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 HOXA5P20719 270 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 PMS1P54277 932 aaKnown RBP5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 BACE1P56817 501 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 SP3Q02447 781 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 RAB3GAP1Q15042 981 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 CERKLQ49MI3 558 aaPredicted RBP5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 TCERG1LQ5VWI1 586 aa5.73□□□□□ -1.49
EXOSC3-204ENST00000465860 ZSCAN25Q6NSZ9 544 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms