RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 RNF146Q9NTX7 359 aa6.4□□□□□ -1.38
CMTM1-207ENST00000465057 FAM105AQ9NUU6 356 aa6.4□□□□□ -1.38
CMTM1-207ENST00000465057 GPN3Q9UHW5 284 aaPredicted RBP6.4□□□□□ -1.38
CMTM1-207ENST00000465057 CTNNA3Q9UI47 895 aa6.4□□□□□ -1.38
CMTM1-207ENST00000465057 FEM1BQ9UK73 627 aa6.4□□□□□ -1.38
CMTM1-207ENST00000465057 STX8Q9UNK0 236 aa6.4□□□□□ -1.38
CMTM1-207ENST00000465057 AP4E1Q9UPM8 1137 aa6.4□□□□□ -1.38
CMTM1-207ENST00000465057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
CMTM1-207ENST00000465057 ZNF536O15090 1300 aa6.4□□□□□ -1.39
CMTM1-207ENST00000465057 PTPRSQ13332 1948 aa6.4□□□□□ -1.39
CMTM1-207ENST00000465057 KIAA1217Q5T5P2 1943 aa6.4□□□□□ -1.39
CMTM1-207ENST00000465057 CHD9Q3L8U1 2897 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 MYH7BA7E2Y1 1941 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 TRIP12Q14669 1992 aaPredicted RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 A0A0D9SFI3 127 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ERICH4A6NGS2 130 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 TSPY2A6NKD2 308 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 VGLL3A8MV65 326 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 GOLGA6L19H0YKK7 550 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ZNF862O60290 1169 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 RANBP6O60518 1105 aaKnown RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 NFICP08651 508 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 GSTP1P09211 210 aaKnown RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 C6orf222P0C671 652 aaPredicted RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ALAS1P13196 640 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 RAG1P15918 1043 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 LIG1P18858 919 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 SLC1A4P43007 532 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ASPAP45381 313 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 NEK4P51957 841 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 STAT2P52630 851 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 GTF2A1P52655 376 aaPredicted RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 BEX3Q00994 111 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 NCBP1Q09161 790 aaKnown RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 MAP7Q14244 749 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 COL19A1Q14993 1142 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ALX1Q15699 326 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 KCNA10Q16322 511 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 MUM1L1Q5H9M0 696 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 CCSAPQ6IQ19 270 aaPredicted RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 MAMDC4Q6UXC1 1216 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 FBXL6Q8N531 539 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 GMCL1P1Q8NEA9 526 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 KLHDC9Q8NEP7 349 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 CHST13Q8NET6 341 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 RNPC3Q96LT9 517 aaKnown RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 KATNBL1Q9H079 304 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 TTYH1Q9H313 450 aaPredicted RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ACAD9Q9H845 621 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 A1CFQ9NQ94 594 aaKnown RBP6.39□□□□□ -1.39
CMTM1-207ENST00000465057 IL17RBQ9NRM6 502 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 KRT82Q9NSB4 513 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 FBXO40Q9UH90 709 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 FAM184BQ9ULE4 1060 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 MYO9BQ13459 2157 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ASTN1O14525 1302 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 ZMYM6O95789 1325 aa6.39□□□□□ -1.39
CMTM1-207ENST00000465057 GIPC1O14908 333 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 KIAA0355O15063 1070 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 ATP8B1O43520 1251 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 DUSP11O75319 330 aaKnown RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 SLU7O95391 586 aaKnown RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 ASGR1P07306 291 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 IVLP07476 585 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 SPINK2P20155 84 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 ADMP35318 185 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 GJA9P57773 515 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 HAND2P61296 217 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FPGSQ05932 587 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TRAF1Q13077 416 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 CUL4AQ13619 759 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 CCDC96Q2M329 555 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TKFCQ3LXA3 575 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 RRP12Q5JTH9 1297 aaKnown RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TMEM63BQ5T3F8 832 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FAM109BQ6ICB4 259 aaPredicted RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TMCO3Q6UWJ1 677 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 LEKR1Q6ZMV7 388 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 EEPD1Q7L9B9 569 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 ZAR1Q86SH2 424 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 ZNF589Q86UQ0 364 aaPredicted RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 PDZD3Q86UT5 571 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FAM160B2Q86V87 743 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 DTX1Q86Y01 620 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FBXO16Q8IX29 292 aaPredicted RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 SHISA5Q8N114 240 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FAM133AQ8N9E0 248 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 C3orf58Q8NDZ4 430 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 NUP133Q8WUM0 1156 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 STAG1Q8WVM7 1258 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 MYLIPQ8WY64 445 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 EVI5LQ96CN4 794 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FAM227BQ96M60 508 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms