RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MMS19Q96T76 1030 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 NAGPAQ9UK23 515 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 EXOC7Q9UPT5 735 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
VAPB-203ENST00000463370 PDE2AO00408 941 aaPredicted RBP13.93□□□□□ -0.18
VAPB-203ENST00000463370 DDX3XO00571 662 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAPB-203ENST00000463370 TACC1O75410 805 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 SOX5P35711 763 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 STAT1P42224 750 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 STAT5BP51692 787 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
VAPB-203ENST00000463370 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAPB-203ENST00000463370 PNMA8AQ86V59 439 aaPredicted RBP13.93□□□□□ -0.18
VAPB-203ENST00000463370 POMGNT1Q8WZA1 660 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 PSMB7Q99436 277 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 NIFKQ9BYG3 293 aaKnown RBP13.93□□□□□ -0.18
VAPB-203ENST00000463370 NENFQ9UMX5 172 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 TGFB3P10600 412 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 ARL2P36404 184 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
VAPB-203ENST00000463370 MAP2K1Q02750 393 aaPredicted RBP13.92□□□□□ -0.18
VAPB-203ENST00000463370 TUBB2AQ13885 445 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 LNX1Q8TBB1 728 aaPredicted RBP13.92□□□□□ -0.18
VAPB-203ENST00000463370 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 SEPT1Q8WYJ6 367 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 GPR20Q99678 358 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 TUBB2BQ9BVA1 445 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 PARD6BQ9BYG5 372 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 HAPLN2Q9GZV7 340 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 ANKZF1Q9H8Y5 726 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 LRRC37A2A6NM11 1700 aa13.92□□□□□ -0.18
VAPB-203ENST00000463370 ANO9A1A5B4 782 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 FOXN3O00409 490 aaPredicted RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 MAPK13O15264 365 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 MXI1P50539 228 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 WNT7BP56706 349 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 NAB2Q15742 525 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 NFRKBQ6P4R8 1299 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 ALKBH5Q6P6C2 394 aaKnown RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 SLC7A3Q8WY07 619 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 RABGGTAQ92696 567 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 BICD1Q96G01 975 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 UBE2TQ9NPD8 197 aaPredicted RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 BZW2Q9Y6E2 419 aaKnown RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 ARID2Q68CP9 1835 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 CENPFP49454 3210 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 ZC3H4Q9UPT8 1303 aaKnown RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 WDR81Q562E7 1941 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 BTBD19C9JJ37 291 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 PDHXO00330 501 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 CXCR5P32302 372 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 NAP1L1P55209 391 aaKnown RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 BRDTQ58F21 947 aaPredicted RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 GJC2Q5T442 439 aaPredicted RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 CCDC62Q6P9F0 684 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 GLYCTKQ8IVS8 523 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 GPR161Q8N6U8 529 aaKnown RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 AFAP1L1Q8TED9 768 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 BRI3BPQ8WY22 251 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 ZBTB10Q96DT7 871 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
VAPB-203ENST00000463370 NOX5Q96PH1 765 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 FAM213AQ9BRX8 229 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 SYT11Q9BT88 431 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 MROH8Q9H579 483 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
VAPB-203ENST00000463370 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 TTLL13PA6NNM8 815 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 ZBTB42B2RXF5 422 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 PALMO75781 387 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 FERP16591 822 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 MCCD1P59942 119 aaPredicted RBP13.9□□□□□ -0.18
VAPB-203ENST00000463370 MFSD14AQ96MC6 490 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 PNKPQ96T60 521 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 TLR10Q9BXR5 811 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 SMARCAL1Q9NZC9 954 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 SEC31AO94979 1220 aaKnown RBP13.9□□□□□ -0.18
VAPB-203ENST00000463370 FTCDO95954 541 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 RHOXF2BP0C7M4 288 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
VAPB-203ENST00000463370 CYP24A1Q07973 514 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
VAPB-203ENST00000463370 CAPSQ13938 189 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 TAS1R2Q8TE23 839 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms