RNA–Protein interactions for RNA: ENST00000462998.1

PTPN23-203, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 3

Gene PTPN23, Length 260 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-203ENST00000462998 URGCPQ8TCY9 931 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 RSPH1Q8WYR4 309 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 BSNDQ8WZ55 320 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 PABPC5Q96DU9 382 aaKnown RBP12.19□□□□□ -0.46
PTPN23-203ENST00000462998 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
PTPN23-203ENST00000462998 CDK5RAP3Q96JB5 506 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 IFT74Q96LB3 600 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
PTPN23-203ENST00000462998 PLIN2Q99541 437 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
PTPN23-203ENST00000462998 TRIM6Q9C030 488 aaPredicted RBP12.19□□□□□ -0.46
PTPN23-203ENST00000462998 GBP3Q9H0R5 595 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 CSRNP2Q9H175 543 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 IGFLR1Q9H665 355 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 RSAD1Q9HA92 442 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 TLR9Q9NR96 1032 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 SPG21Q9NZD8 308 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 MUC3AQ02505 3323 aa12.19□□□□□ -0.46
PTPN23-203ENST00000462998 CNTNAP2Q9UHC6 1331 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 NT5C1B-RDH14C9J2C7 533 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 H3BQ06 376 aaPredicted RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 NCK2O43639 380 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 OFD1O75665 1012 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 BMP15O95972 392 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 SSBP05455 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 BMP1P13497 986 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 ITGA4P13612 1032 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 SYT1P21579 422 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 NAMPTP43490 491 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 BCAR1P56945 870 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 PLPP4Q5VZY2 271 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 MRPL10Q7Z7H8 261 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 HSCBQ8IWL3 235 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 SMG8Q8ND04 991 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 CNNM3Q8NE01 707 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 KIFAP3Q92845 792 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 KIFC3Q9BVG8 833 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 RUSC1Q9BVN2 902 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 APOL6Q9BWW8 343 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 ENTPD7Q9NQZ7 604 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 TBC1D13Q9NVG8 400 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 PRMT7Q9NVM4 692 aaPredicted RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 PUF60Q9UHX1 559 aaKnown RBP12.18□□□□□ -0.46
PTPN23-203ENST00000462998 HES2Q9Y543 173 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 IPPQ9Y573 584 aa12.18□□□□□ -0.46
PTPN23-203ENST00000462998 HIP1RO75146 1068 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 NPTXRO95502 500 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 PRKCBP05771 671 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 NRIP1P48552 1158 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 PLCB3Q01970 1234 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 KRT17Q04695 432 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 RESTQ13127 1097 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 SF3A1Q15459 793 aaKnown RBP12.17□□□□□ -0.46
PTPN23-203ENST00000462998 MAPK6Q16659 721 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 LEXMQ3ZCV2 418 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 SLC27A1Q6PCB7 646 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 RBM23Q86U06 439 aaKnown RBP12.17□□□□□ -0.46
PTPN23-203ENST00000462998 CABP7Q86V35 215 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 SLC39A11Q8N1S5 342 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 PRIMPOLQ96LW4 560 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
PTPN23-203ENST00000462998 PNMA5Q96PV4 448 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 NXF3Q9H4D5 531 aaKnown RBP12.17□□□□□ -0.46
PTPN23-203ENST00000462998 NRDE2Q9H7Z3 1164 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 UBN1Q9NPG3 1134 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 LZTS1Q9Y250 596 aa12.17□□□□□ -0.46
PTPN23-203ENST00000462998 N4BP3O15049 544 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 LINC01565O15544 149 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 POMCP01189 267 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 CA8P35219 290 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 MLH1P40692 756 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 UBA7P41226 1012 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 NDUFV1P49821 464 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 AFF1P51825 1210 aaKnown RBP12.16□□□□□ -0.46
PTPN23-203ENST00000462998 ERVFC1P60507 584 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
PTPN23-203ENST00000462998 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 CLUL1Q15846 466 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 FAM187BQ17R55 369 aa12.16□□□□□ -0.46
PTPN23-203ENST00000462998 TMEM119Q4V9L6 283 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms